FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003678610

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003678610
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31
Sequences flagged as poor quality0
Sequence length100
%GC65

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCCCTCGGCGGCGCCGGCGACGTGCTTGACGCAGACCTCGAAGCCGACC26.451612903225806No Hit
GGCGCGCGCGCGGCGTTCGAGCAGCCCAAGATCGCGGCGCACGGCGACCT26.451612903225806No Hit
CGCTGGGTGCAGGCGGTGCGCCGCGGCGTGGCGCGGCGTGCCGGCGACTC26.451612903225806No Hit
GGTCGGGCTCAGCGCGCCGCCCGTCCTGGTGACGCATGTTCTCGCCGGGC26.451612903225806No Hit
GTACAAGCTGGCTTTGGCGGCTCCGGAGCGGCGGGCGACTTCTTCGAAGG26.451612903225806No Hit
ATGCCGCCGGGCAGGGCGATGAAGGCGTCGCTGCGTTCGGCCATGATGGC26.451612903225806No Hit
GCGTATTGCCTGTTTGCCGGACATATGGGATGCCCGGTGCGAAAGGGGCA26.451612903225806No Hit
CGATATGAACAGCTTCCCGCTCGAGTGAGCATCTGTCCCTCCGCCTGCAT26.451612903225806No Hit
GTGTTCTGTCAGCTCGATGCGCGACAGGCCGAGCAGGTCGTCGATCAGCC26.451612903225806No Hit
GGTAAAAGCTACGAGGCAGTATTCGAACGCCAGCATCCGCCAGGATTTCG13.225806451612903No Hit
GTGTTGGAAAGTTCCTGACCGGCGGTGATGCCCAAAAGAGCTTTCTTGGC13.225806451612903No Hit
GTTTTCGTCGAGGTCGAAGCGCACCGGCGCATCCGCCGCGACGACCGCCA13.225806451612903No Hit
ATCCATGCCTTCGACTCGGCGCTCAACGCGGCGGCGCGCCGCCCCTGGCA13.225806451612903No Hit
CTATTTGAATTACTCATAGTCGAGACTAATTTTGTTTGCTTCGTGGCGTG13.225806451612903No Hit
CCGCGGCGGCGGCTTCGAGGGTGCGGCCGTGGCTCAGCAGCTGCTCGATC13.225806451612903No Hit
GGGCCGGAGACCTACTCGAAGCGCACCATGGCCGAGGACATCGTGCAGAT13.225806451612903No Hit
GGTTGTACGATCTCCTGTTCACGTGTGAGCTCGCCCTCATGTCAATGAAG13.225806451612903No Hit
GTACAAGCTGGCTTTGGCGGCTACGTAGCGGCGGGCGACTTCTTCGAAGG13.225806451612903No Hit
AATGTCCACTCCAGCGGAGTAGTCCACTTTGTAGTAAGTGCCGGTGGCGA13.225806451612903No Hit
GGTCGGGCTCAGCGCGCCGCCCGTCCTGGTGACGCATGTTCACGCCGGGC13.225806451612903No Hit
GTTTTTCTCTCATCACCCGACGATCGATACGACCACGACGGAGGCTGACG13.225806451612903No Hit
GCTCAACGACCTTGCATCGCTCTTTGGTCTCAATCAGCTGAGACATCATT13.225806451612903No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)