FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003678611

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003678611
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32
Sequences flagged as poor quality0
Sequence length100
%GC66

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCTGTAACACGACGTCGAAGCTGTCGTCGGCGAACATCGACAGCCCCT412.5No Hit
CCTCGGTTCGAAGCTGTGCGACTTCGGCCGCGAGGTCTTGGCCGAGGGTG39.375No Hit
TACTCCAGCCGGGCAATCCGGGCCAGCCTGCGCCAGCGCGGCATCACCGC26.25No Hit
CACGTCGCCGTCGAGCCGGGCCCGGCAGGACAGCGACGCGAGGTTGCTCC26.25No Hit
GAACAGCCGCACCGCCAGTTGCTCGTCGGCCTGGGCGCGCTGCTGCACCA26.25No Hit
GGGCCCGGGGCGCGCGCACCGGTGCGGTGCGCGCCGCTCACCGGGCCCGT26.25No Hit
TTCGATCGCGTGGGCGAAGGTGTGACCGAAGTTGAGCAGCGCCCTGGCGC26.25No Hit
GTCCCCATTTCGTCTTCCACTTTGCGTTTTTCAGAGTGAGACATGTAGTT13.125No Hit
GTACTGGGAGTCTGGCGCGGTAAATATCTTTATACGTCCTTTTTCATGTT13.125No Hit
GGGCCCGGGGCGCGCGCACCGGTGCGGTGCGCGCCGCTCACCGGGCCCGG13.125No Hit
GCGCGCCTCGATCAGCGATCGGCGGAACAGGGCGTGCCGGCCTCGATACA13.125No Hit
GTCTTCCTCGGCCGGGTCGATGCCGCTGACCTGGATCGGCTGCATCGCCC13.125No Hit
GATCCCAAGCCTAGGGCGAAATGCGCCGCGGCGCTTATTCGGGCCGCCAA13.125No Hit
ATCTACCGCTTCCTGGCCGGCGGCAACGTCGAGGCCGAGTACCACGAGGA13.125No Hit
TCCGGAAACGTGGCGGGCACCAGTCAAGCTGCCAGGCATAGCTAAGACGC13.125No Hit
GAGCTGGAGGCGTTCCGGGCGGCGGTCCAGCCCGTCTACGGGCTCTGGGA13.125No Hit
CTCCCGGGGCGGCGGGCTGGGGTGGACCTGCACGGCGAGGTCGGTCAGCT13.125No Hit
GGTGCAGCGCGTGCGCGGCATGATCGCGCGCAGCGAGTACAAGCGACGCC13.125No Hit
GATCGAAGTCGCGGCACTCGGCCTGGATGCCGTGCCCACGATGATCTTCG13.125No Hit
TTCCCAGCAAACCCCTTGGCTGCTACGGAGATGGCGGTGCGATTTTCACC13.125No Hit
GGTATCGATGATCGCATCGACATCGAGGCCGTCGGAAAAGATCAGCAGCT13.125No Hit
GGAACACGCCGCCGTTGACGCCCACGTCCTCGCCCAGCACCAGCACCGAC13.125No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)