FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003678612

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003678612
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32
Sequences flagged as poor quality0
Sequence length100
%GC66

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGCCATTCAAACGATGATCGCGCGGCTCGTGCCCACCGGGGCGCGGGTG412.5No Hit
ATCAAGCCCCTCGAGGATCGCATCGTTGTCCGCCCCCTGGAGGCCGAGCA39.375No Hit
GAGCAGGATCAGAAAATCTTCGTCGAAATTTCCTATCAGCGGCTCGCGAC39.375No Hit
CGATCGACGCGTTCGGGCAGAAGAACCTCGTCGGCATGTTCCACCAGCCG26.25No Hit
CGAACGTGGGTGGTCGCCCGCCGCGGGAGCCTTTGCGGGTGCGGTTGGCC26.25No Hit
CAGCGGCACGACGCCCGCGACCGGCGCCGAACTGCCCCCCGCCACCGAAC26.25No Hit
GCCAATATTTTCTGTATCGCCTCCCGGCCTTCCAATTGAAGGGTATATTG13.125No Hit
CTTCATCTCGTTCATTTCGATGACCTCGATGATCGGCCTGTCGCTGGGCG13.125No Hit
CGCGAGCATCGTCGCGACGAGGACGCCCGTGGAGTTGAGCGGGTAGGCCC13.125No Hit
GAAGGGATTCTTCGGTGTGCGCGCCTGGTGCGCCGAACCGATGACGACCA13.125No Hit
CACCTGCCGCTGGGCGCCGAGCGCCCGCAGCTTCTGTCCGACGATGTCGG13.125No Hit
GGATGAGATCAAGAACGGCGCGCCCGGCGCGCACACCAACGCCGCCGACA13.125No Hit
ATTTGAAACAGTGGTCAAATCTGGTTTAATCCTTCCTTCGATTTTTCCGA13.125No Hit
AGCAACTGGCGGCCGCGCCCTACCAGGTTTTGAAAGACTGGAACCAGCTG13.125No Hit
GGCTCTCGTCGTCCAGAAGTACGGCGGCTCGTCCGTGCAGGACGCCGAGC13.125No Hit
GGTGGCCGATGTCGTCGTTGATCGTCTTGAACCGGTCGATGTCGAACAGG13.125No Hit
CACCACCCGCCGGCGCCGATGTCACCTTCGACGAGGAGATGGCGAATATG13.125No Hit
CCCCACCCGCCGGCGCCGATGTCACCTTCGACGAGGAGATGGCGCATCTG13.125No Hit
CTCAGGGCCAAGCTGTGGTTTTGGCTTTGGTTTCGGCTTTGACGGAGTGA13.125No Hit
ATCGAGCACGATCCCAGCGGCTACGACGACGTCGACCGGGCCTTCGCCGA13.125No Hit
AAACACACCACAGTGAAGTGTAGGTCAGGGCAGGGTTGCGCCACGAATGA13.125No Hit
CACGTCTTGCGGCAATGCGCGTTGCAAGCGAGAGCTTGATCTCGTCGAGT13.125No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)