Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00003678945 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1423501 |
Total Bases | 142.3 Mbp |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 55 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT | 2848 | 0.20007010883729623 | No Hit |
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA | 2564 | 0.18011929742234112 | No Hit |
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC | 2365 | 0.16613967956467893 | No Hit |
TCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCGGCGTTATT | 2170 | 0.1524410590508893 | No Hit |
ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCG | 1903 | 0.1336844863473928 | No Hit |
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT | 1860 | 0.13066376490076229 | No Hit |
CTCCCATCCTCTCCCCAAGCTCCCATTTCTCCAGGGCTTGTCCCTGCGGT | 1753 | 0.12314708595217005 | No Hit |
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA | 1647 | 0.11570065633954596 | No Hit |
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA | 1430 | 0.10045655043445703 | No Hit |