FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003678983

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003678983
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22
Sequences flagged as poor quality0
Sequence length100
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAATGGCAGAGGAGTGTTTACATGGGCGGATGGTGACAAATATGAAGGCG29.090909090909092No Hit
AAGAACAGGCGCTGCATGCGCTGATCGCTGCGCCACAGGTCCAGAAGCTC29.090909090909092No Hit
GGTCTGGGCGGTGAGAAGACTCGATGGACTCAGGCGGCCGAGGATCTGCA14.545454545454546No Hit
CGACTACATCGTTTATGTAGTTGACTTTGTAGCTGGGCAATGGTTTGACA14.545454545454546No Hit
GCGTTAACCCGCAGCCAGCGCGAGCAAAGCATCGCTTTACTGGCAAAAAC14.545454545454546No Hit
AGGTAGACCGGGCAGATCTCGTTCTCCACGACGCCGCGGAACTCCGCGCG14.545454545454546No Hit
TCTGTGGCTGCTCGTTGCCAGAAGAGGCCGAGGCGTGATGACCACCACTG14.545454545454546No Hit
ACACGGTGCCGTGGCGACGATTCGCGTAGATCTTGTTCACGTTCCGGTCG14.545454545454546No Hit
GAATGCTCGAATACACAGCACAGGCATATCGATTACTAGCGGTGGTGGCG14.545454545454546No Hit
TTTCAACGTTGTGCCATGGCGTGTGCTGACAAGATAAAAGACAAGTCAAG14.545454545454546No Hit
GTCTTTCAATCCGATAACCTTGGCAAGCATACAAGCCGGCTCGTTCGCCC14.545454545454546No Hit
GTCGAAACATCCGGCATGGCGGGAATCGGCGGTCGCAAATATCCTCTTCG14.545454545454546No Hit
ATATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTTAGCTGGGCT14.545454545454546No Hit
AATCTGGATAGAACGAAACAACATTTGACGACACTTGGATAACGAAATGA14.545454545454546No Hit
GCTGTAGCTGAACAAGTAAAAGAGATTCTTTGTGTGACTTAACGTAAGAG14.545454545454546No Hit
CTTTCACCAGGTCATCTACTTGCAGGAGGAGCCGCATCTCAACACGTCAT14.545454545454546No Hit
CCACGACGACGAGCGCGTCCACGACGATGGCGAGTTGTCGGCCGGCCACG14.545454545454546No Hit
GAACAAGTGCAAATCATGTAGTCAGAAGTGGTCAAGAGCTCGTCGAATGG14.545454545454546No Hit
TGGCGTAGATGCCCGTCGCGTACGGATTGGCTGCGGGCTGGAAGACGGGT14.545454545454546No Hit
CTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGAT14.545454545454546No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)