FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003678984

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003678984
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22
Sequences flagged as poor quality0
Sequence length100
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTCGACGCCGCGCGAGCTACTTCTACCGCGTGCCGGAACATGCCGGGCG29.090909090909092No Hit
ATAAACAGCATGGCAACGGTGTATACTCCGTTGCCATGCTGTTTATCGTC29.090909090909092No Hit
CCCGCCGGGCGCAGCAGAAGGCGACCTTCCCGGGCATGTGGACCAACACC14.545454545454546No Hit
AATATCGACTTTTTTCGGCACCAGACGATTTTCATAAAACAGATCTGCCG14.545454545454546No Hit
CTCTTCGCCACACTTGCCAACACATGCCTCCATCTCGGCACGATTCTTCT14.545454545454546No Hit
AAGTGATATATCACAATCGGCGGGTGAATGAGACGGCCGAGTCCAGAGGC14.545454545454546No Hit
GAGTTGCGCGTGCCCTCCAGCATCGTCGGTCGTATCATTGGCAAGTCGGG14.545454545454546No Hit
ATAATGTTTACACTGAGTTTATTCTAACCATTACTCTTTTGATTTTTAAG14.545454545454546No Hit
AAAAAAAGAGTTGATTTAGAATTGTCGAGTGAGCCGTGGTGAGTCGCCGT14.545454545454546No Hit
GCCTACGTTCGGCAACGGTTGTAGGCATGATAAGACGCGCAAGCGTCGCA14.545454545454546No Hit
CTTCAGTAGCTCTTCCAACTTGCCACGATCGATCTTTTCCTCTTTGGGCA14.545454545454546No Hit
GCATACGAATTCATGTCCTTGATGAGATTGAAGAGGTCCGTGCAGCTCTG14.545454545454546No Hit
GACTACAGGCGCCCGCCACCGAGCCCAGCTAAATTTTTTGTATTTTTAGT14.545454545454546No Hit
GGTCTACACACTTCGCCGCCATCCGTTCAAGTCACAATATTTGAGTCGAG14.545454545454546No Hit
ATAATAATCCGTCATCATCATCATCAAGTCAATCAGCAAGTCGTGGACCG14.545454545454546No Hit
GGGAAGGGCGTCGGTGTTGTCGGCACGCCGTCTGCGATGGCATGAAAATC14.545454545454546No Hit
ATGTAACGGACCGGCCGCTGGGTCGACTCCAGGGCATGACGCTCACCGCG14.545454545454546No Hit
AAAGATCAAGTCTTGCCGAGTATTCACTTCGAGACGACCAACAAAGCCTA14.545454545454546No Hit
GCCCACCGCATCGCTGGATGGCGACACCGGCCGTTCCATCATGCAGTTCG14.545454545454546No Hit
AGTGTCCCGCTCAGCGAGTACTTGGCCGGATCGCTGCAGTCAATCTTCTT14.545454545454546No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)