FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003678986

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003678986
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12
Sequences flagged as poor quality0
Sequence length100
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACGCCAGTGGCAACGTGCACGACTTGTCCTCACCCGATCGCTATCAGA216.666666666666664No Hit
AACTCGTTGTACGAGTTGAACTGCTACTCGCCGCAGCAAGTGTGCAACGA216.666666666666664No Hit
TTTCCAGCTCCACCCCTTCCATTGCCAGCAGCTTCTGATACTGCTTGACG18.333333333333332No Hit
TCTTCATCGGGAAGCGGGTTGCGGCCATTGCGCGAGCCGGGAAGGCCGAC18.333333333333332No Hit
TCGTTGAATAGCTCGATCACGGCGGCGCTCCTTCTCTCTGTCTCGTCTGA18.333333333333332No Hit
CGACTCGCTCGACTTTGTGCTCGCCGAGACGGACACGATGAGTGCGAGTA18.333333333333332No Hit
CTCCCACTCTGGCCACATGTTCATATCTAGAAAAAAGCCAATCAGAAACG18.333333333333332No Hit
TGCTTCGGGTATATTTTTACTCAACGTTGACAATTGCTTGCTCAACGTAG18.333333333333332No Hit
CGTCAAGAGTGCCTTGGAGCGAATGATCGAAGAAGAGGAACAAGAAAATC18.333333333333332No Hit
TGTCAGCATAGGTGGTGAACGTCTGCGACTGTTTGGTCGGTATGGTCGTG18.333333333333332No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)