FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003679520

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003679520
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69
Sequences flagged as poor quality0
Sequence length140
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTAAGGTCAACCACTCGCGATAATCCCTACATGGTGGCATCTAACCGT34.3478260869565215No Hit
TCCCATCTATGCAACTGGATTGGGGGGTGTCATTCCAAACACCCTCAGAT34.3478260869565215No Hit
CTGTACCCCTGAGCCGGAAACTATCGCCTTCTTCGCCGATGTTGCCGACG22.898550724637681No Hit
CCTCATTCCTCCCTTCATTACGTTTCTTTTTCTCAGGGGGTTTGTAAATG22.898550724637681No Hit
CATAGCGACGTCGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTG22.898550724637681No Hit
ACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCCCTCC22.898550724637681No Hit
GTCTCGGTTGGCCTCGGATAGCCGGTCCCCCGCCTGGGCGGGATTCTGAC22.898550724637681No Hit
CTGTCAACAGAGTCTCCCTTTGACTAAGAAAGCTGTGTTTTTTTCTGCTT22.898550724637681No Hit
GTATAAGAGACAGTTAATCTTCTTCCTAGATTTTGCTCTTGGCCTACCTA22.898550724637681No Hit
ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCG22.898550724637681No Hit
GGTCTCTGGTTTTCTCATTCATGCCAATGCTTGTGGGCTGGGGTTGGCGT22.898550724637681No Hit
AAATGGATGTGATTGGAGTAGGCGGCATTGACTTTGAAGATAACATCGCC11.4492753623188406No Hit
GAATTGTTCTTTTTAAATTTAAAGTTCAACTTGGCTTACATCAGAAATGT11.4492753623188406No Hit
GAATGTGAAGGCCCACTCACAGACTGACCGAGCGAACCTGGGGACCCTGC11.4492753623188406No Hit
CTCTGGATCACTGTGACCATCTAGGTCTTCAGAGCCTTCCGTTAGAGGTG11.4492753623188406No Hit
GTTTACTAAGCTCAAGATTTTATGTCTTTATGAAGTATTCAGGACTGTGC11.4492753623188406No Hit
AATCCACGCCTACTTCAGTGGTATTCGCCATAGGTCCCGGCCTGCGAGAT11.4492753623188406No Hit
GGAGTAGAGTTTGAAGTCCTTGAGAGAGGATTATGATGCGACTGTGAGTG11.4492753623188406No Hit
GCGTTGGATTGTTCACCCACTAATAGGGAACGTGAGCTGGGTTTAGACCG11.4492753623188406No Hit
GCTTGAGAGCTATTGCTTTGTTAAGATATAAAAAGGGGTTTCTTTTTGTC11.4492753623188406No Hit
CGTCTGCTCCGAGAAAAGCTTTGGAAAAATGGAACTGGGAAAGGAAACTG11.4492753623188406No Hit
TTGCAGAGGTTAAGAAACTTACTCATGGTCAGTAAGTGGCTGAGAGAGGC11.4492753623188406No Hit
ACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCACTCCCGACCCG11.4492753623188406No Hit
GCGTAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCC11.4492753623188406No Hit
CATTGTATGAGATTGATTTTATTATCCAGATATAAAGAAGTCAAGCTCAA11.4492753623188406No Hit
GTACATGGGTGTCCCATCCTGCTGTGTCATCAGCATACAGCAGGATGGGA11.4492753623188406No Hit
GAGGCTGGGAGTGACGGGAAACATCAAAATCCACCCCTTCTTCAAGACCA11.4492753623188406No Hit
ATCCGAGGCCAACCGAGGCTCCGCGGCGCTGCCGTATCGTTCCGCCTGGG11.4492753623188406No Hit
AATTGCAGACGTCTCTTCTTGCTCATCCTTTGGAATTTTTTTTCAGCATG11.4492753623188406No Hit
TTGCTCCATTCCGTGCTGGCTGCGCTTGCGGCCAGCATACCTCACTTCTC11.4492753623188406No Hit
CCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGGCG11.4492753623188406No Hit
CTCGTACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAA11.4492753623188406No Hit
AGGTCGCAGTGGGCGAGTCACTTGAGGCCAGAAGTTTGAGACCAGCCCGG11.4492753623188406No Hit
GATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTATC11.4492753623188406No Hit
ACGTTGATCTGAAGCAATCTCAGCAGAAACTAGAACATTTGACTGGAAAT11.4492753623188406No Hit
CTTTACGAGTTCGCAGAACAAAGACTTTGCAACTGCAGGGGAGCCCTTCG11.4492753623188406No Hit
GATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC11.4492753623188406No Hit
CATTTAAAGCTTTTAGAGAATACACTACACCAGGGAGTATGACTACTAGT11.4492753623188406No Hit
CAGGTAGGCTCTCAGCTGCTCCGCCACACGGGCCGCCTCCCACTTGCGCT11.4492753623188406No Hit
ACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAAAATGCGTTTT11.4492753623188406No Hit
GATTTTGACCTTGTATTGAAGTTAACTGTTCCCCTTGGTATTAACGTGTC11.4492753623188406No Hit
CGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGGGGACCCCCCGA11.4492753623188406No Hit
TATCACCGTCACTGTCTCGTCTCCTGACTTTGAGACCACCGAGGAGCTGG11.4492753623188406No Hit
TCCAATGGATCCTCGTTAAAGGATTTAAAGTGGACTCATTCCAATTACAG11.4492753623188406No Hit
GTTCGGCAGAGGGCGGGTCGTTCGCCCTACTGGGGCGCATTGATCGTCGG11.4492753623188406No Hit
CGCAGGTGTCCTAAGGCGAGCTCAGGGAGGACAGAAACCTCCCGTGGAGC11.4492753623188406No Hit
GCCGACAAGCGCAATTTGAAGCACACCGTTTTTCTTTCTTCTTTCACGGT11.4492753623188406No Hit
GTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTT11.4492753623188406No Hit
GATCTCTACAAGGAGAACATAGATGACACACACAAAGCATAGATGACACA11.4492753623188406No Hit
ACCCACGGAATCGAGAAAGAGCTATCAATCTGTCAATCCTGTCCGTGTCC11.4492753623188406No Hit
AAAAGAGTTTTACTCTAGAAATGTTTGAAATGTAAATTGAAGACACTTAG11.4492753623188406No Hit
GCGTTATTCCCATGACCCGCCGGGCAGCTTCCGGGAAACCAAAGTCTTTG11.4492753623188406No Hit
GTGCAGTTACCAGTGCCCTGGGAGGTCACACTGCCCGTCGGACCTTGGCA11.4492753623188406No Hit
GTGTACAAGGAATTCGAATTATTAATACGTTTATTTCTGTTCTCCTGCGC11.4492753623188406No Hit
GCTCTGATCAAGCGGATCCAAGCCATGATTCCCAAGGGTGCGCTAGCTGT11.4492753623188406No Hit
GGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCG11.4492753623188406No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)