FastQCFastQC Report
Tue 10 May 2022
EGAF00003679610

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003679610
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1895562
Sequences flagged as poor quality0
Sequence length140
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG27150.14322929031073633No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA21440.11310629776287982No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA19030.10039239022516806No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)