FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003679617

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003679617
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61
Sequences flagged as poor quality0
Sequence length140
%GC61

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCATTCACCGCCTTTCGAAAGGGCTGACCCTTGAAGACGGCCCTGTCAA23.278688524590164No Hit
CTCGTACACCCTGTCTCTGAGGTCCCCATCGGTTCTCGGGAAACCACGTC23.278688524590164No Hit
CCCCCAGTCGATGTCCCACAAACTGCCGTTGACGATGCCCCCACCAAGAT23.278688524590164No Hit
GGTTAATGCCGCGCTCGGCCAGCTCTGCGCGGAAGGTCGCCTGGTTGAAC23.278688524590164No Hit
CTAGCCAGGGGCTGCGTGGACATCTCGGACGGGCTGACGCCGAGTGTCAG23.278688524590164No Hit
GACTTGAGACGGGACCGGGTCGCTGGCCTTGCCCTTGTCCTAGATTCCGA23.278688524590164No Hit
CGGCCGCGGAGTGGAAGGCGATGTCCCCGGCGAGGCGGTGCTCGGCGTCG11.639344262295082No Hit
CCGGACGATGATCTTCAACGACAAGGACGACGCCGTGAGCGCGTTTGTTG11.639344262295082No Hit
ACCCGACAGCGCCCTGAGAATCATTAGCGTGCACCAGGTTGATCCGACCC11.639344262295082No Hit
GTGTGGACTAGGGCCGGGGATGCTGCGAGTGGCGCGGGGGCATTATCGTG11.639344262295082No Hit
GTTGCGTACCGATGCGAGCTCCGGGGTGGCACCGATCTTCGTCGATCCAG11.639344262295082No Hit
GGACGATTCGGCGTAACCAGCGAGTACCTGGTCAACGCCGACGACATCCA11.639344262295082No Hit
TGGTGTCGTTGTCACTGGCGAAACCGGTGATTTTGCGATCACTGGTGTAC11.639344262295082No Hit
CTGTGGCCGTCAGCTCGACCCGGCCGACCTCATCGGCCCCAGGTCAAAGA11.639344262295082No Hit
GCCTGAGACGCGTCGACGACCATGACGGCACCGACGGAGTGGGCCTGCTC11.639344262295082No Hit
ACTCACGACCGCGCAGGATGCCGGCACGCGGACGAGCCTCGTCGCGATAC11.639344262295082No Hit
GAGAGAACCTCGGTCTGATCAGGCTGAATGAACTGCATGACCAACTGACG11.639344262295082No Hit
GTCATGTTGTCTCCCCCCAATGAAGTGATTTCATGCTGCCGTTGGGACCC11.639344262295082No Hit
CCTTCTGCTTCACCGCGATCTTCGTGTTCTTCTTAGTCGTCGATCGTCGC11.639344262295082No Hit
AAGTCGTTCCAGAAGCTCAGGAAGTTGAACAGGATCACCGTGGAGATGGC11.639344262295082No Hit
GTCCCAGGGTGTTCGCGGTGTAGCGCGACCGCATGAGTGCTTCGGCGGTT11.639344262295082No Hit
TCCCACCACGGTGTCGACGCCGTGAGGGAGCTGCTCGACCCAATCGGCCC11.639344262295082No Hit
CTCCTTGACGGCGACGGGAACATTCCCTCGCAGCTATGGCCCCTACTGGA11.639344262295082No Hit
GTAGCCATGTCGCATCATGACGACAACCCTGAGAAGATGGCCCGGATGCG11.639344262295082No Hit
ACGCAGGCCCTTGCCCAGACCGACACCCCACAGCGTCTAGCAGGTGCCAT11.639344262295082No Hit
CCTGATCACCGTCGACTAGGGAGATTTCGGCCTCGTAAAGATACCCGTGG11.639344262295082No Hit
CTTCACGGCTAACGGCGTATTGGGCAAGCAGGAGGTCGTAGACTGTGGTG11.639344262295082No Hit
GGATCTCCAGGGTGTCGTCAGATACCGACTGGGTAGCCGTGACCATCTCG11.639344262295082No Hit
TTGTCGTGCTGTACCTGGCCGCTGTGTCTGCCATGCCCTGGTTGGTGGAC11.639344262295082No Hit
GCCCTAGGGGGTGGCAACTGCGAGTTGACTCGCCCCGGTGAGTCCTATGT11.639344262295082No Hit
GGGGAACATGCCGGACGCATCGTCGTTCCGACTTACATGATGCTACCTGC11.639344262295082No Hit
GGCCCGCCGCCGCTGCACCCAGCGGACCAGCGCCTCACCCTGCACCCGCT11.639344262295082No Hit
GTACGATTATGGTCCAATCTGGTAAAAGGACTCGCGGTAGCTTCTTCCAA11.639344262295082No Hit
GTATTGACGAGCAGCACATTAATCTGCCCGCGGTACCCGGAATCGATCGT11.639344262295082No Hit
GTGGTGCATCGCGTGGCCAATGAGCTTGAGGGCGATAAAGCCCAAAATCA11.639344262295082No Hit
CCCCGAACGCCATGTGGACGATCGTTGGATTGGTGAGGCCACCTTCGGAA11.639344262295082No Hit
CGTCACGGGCGGGCTGATGCGCCGCCTGGGTGCCGTTGAGACGCTCGGGC11.639344262295082No Hit
GTGTAGCGGGAGCGGTAGTACATAGCCTTGGGGAAGGTTGCCCGCACGTC11.639344262295082No Hit
TACGAGCACTGGGCCTTTACTCGCGATGACGAGTGGCTACGTACTCGGGG11.639344262295082No Hit
CGGTATACCGGCCCTCGTGATGGCCCTCAGGATTAACGAGTTCCGCCACC11.639344262295082No Hit
AGCCATGCCTTTCGGGTCATGAGACCGTCGGTGAGGATCGGATAGATGAA11.639344262295082No Hit
TTGGTACACCGGTAGCTAATAGCAAAGTAGCGACCAGGTTGCGCACCTGA11.639344262295082No Hit
CTGCACTACATGGGGATAGCATGTCTGGCGATGTCGGGGAGGAGCACTCG11.639344262295082No Hit
GTTCTTGGCATGCTGGCTAGTCGCCCCGCGCGGGCTACTCGCGCTCCGTC11.639344262295082No Hit
CTATGCCACGGAGGTCAAGGCCGGCATCGGCGGCTACGCGCATCAGCTTG11.639344262295082No Hit
GTGGTATGTCGAGTGGGGTCGTTCTCAAGAATTTGGAGAAGGAATTCCAG11.639344262295082No Hit
GTATGGTGGCGACGGTGCGGATGCGATTGCGTCCGCAATAATCATGGAAG11.639344262295082No Hit
CCGGTACGATGCTCGACACCTCGCGGCTGCGTTGGCTCATCCGTCAGTGG11.639344262295082No Hit
GCCAAGGGCTGCCAGGATCTGTTCTGCCTTGCTCATGATGTCTCCTTGTT11.639344262295082No Hit
AATCAAACTCGCTCGTGAGCTTCGGTCGATGGGAGCACGGGCGTCGGTAG11.639344262295082No Hit
CAACGACCTCATTGACTGATTCCTCCCGGCTGACGGGAATAGACGCTGTA11.639344262295082No Hit
CCTTGGTCTCGACGCCGAGGTTGGGAAGCACGAGGTCGTCGTCGGGTCCG11.639344262295082No Hit
GATGAAGACGTACCTCGTCAGCAAGGGAGTTCCGGCGGCCAGGATCGTCG11.639344262295082No Hit
CGTCGAACGTTCCGGTCCACACCTGGTGACCCTTGTCGTCGAGAACGCGG11.639344262295082No Hit
CCGCACCGTCATGCCCGGGGCCGAGCCTGCTCCGCAGACGGGACGCGAGC11.639344262295082No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)