FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003679618

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003679618
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61
Sequences flagged as poor quality0
Sequence length140
%GC61

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGTATGGGCTAGCGGCAAGGTGAGGAGTGCAAGGGCCTGGATGAAGATT23.278688524590164No Hit
AGGTCGAGGAGCTGGCCCAGTTCTTCATGGGTAAGTTCACGCATATCTCC23.278688524590164No Hit
GGATCTATGAGCGTTCCATCTATCACTCTCAACGACGGAGTTGCCATCCC23.278688524590164No Hit
GATGGTGGCATGTCGGGCGCGCAATTGGTCGACGGCGGAGAACTCGACCA23.278688524590164No Hit
ACCGGCTTACTCAACAAAATTGCGGCCTACAAAGCCCAGGATGGCGGTCT23.278688524590164No Hit
GTTCGGACAGCTGGGTGACAGGCTGAGCGGCACGACGTGGGTTTGTCATA23.278688524590164No Hit
CGAATGCCCCAGTCGAGATCGCGGGTAATAGCGCGCGGACGCAACTCCTC11.639344262295082No Hit
CTGACTGGGGACTGCTGAAGACGATGTACACCAGTGATCGCAAAATCACC11.639344262295082No Hit
CGCCAAGAACGACGCCGCGCCCCGCACGAACAGAATAAACGGAGCGCGGT11.639344262295082No Hit
GCATCATTCTGATCCCACGATAATGCCCCCGCGCCACTCGCAGCATCCCC11.639344262295082No Hit
ACGATGAAGCGTGTCGAGCACATCTTGGCGGCCTTGGGTGGAGTCGACAA11.639344262295082No Hit
GTTCAGGACGAAACTGTCCCCATCTTCGTCGGCTCGACACTTTAGTGCAG11.639344262295082No Hit
CCTACAACATGAAGCATAACCAAGGCAACGGCGAGGATAACCACGACGGG11.639344262295082No Hit
CTGCCACACCCATCGATGAGAGCCAACTTCCAGTCGGTCCTCAGGTCTCG11.639344262295082No Hit
GACTTGGCATGCGACGCCTTGGTCGTCGTCGCCGAACGCGGAAGTCAGCG11.639344262295082No Hit
GTCTACTGGCATCCCCGTTATGAGTTCAAGCTCGGACTCGTTCGGCATGA11.639344262295082No Hit
GTCTACGGGCAGGCCGTCGACGCCGTCATCGACATCAAGCGCAACCAAGC11.639344262295082No Hit
GGATATATCCGCCGGGTCGCTCCCGGCGTCTACTCGTGGCTCCCGCTCGG11.639344262295082No Hit
CGGTAAAACCCTCGCAACCTCGATGTTCATGGTTTGTGTCGCCCTGGGCG11.639344262295082No Hit
GTGCTTATCAGCCAGGAAATCCACACCTTCTCCGGCACCCTCTTCGACGA11.639344262295082No Hit
GCCCACCAGCATGCTTGATCGAGGTTAGCGGAGCCGCACCGGTTCCACCG11.639344262295082No Hit
GTATCGATCAGGGCATGAGGTGGCGCCTCGTCACCGCGCTTGCCAGAGTG11.639344262295082No Hit
GATGCGAGGTGTGGCGATGCAGCTCGGTGGGATCATCCCGGTCGTCCTGC11.639344262295082No Hit
CCGTTGGGCCTTTGCCTGGGCGTTCGTGGCGATGAGGTACATGATTGAGG11.639344262295082No Hit
AAAAGTAACGGCGGCGCATGCCAGCACGGTGATAGCCATGGAGGCGGCAA11.639344262295082No Hit
GGGCGACACCCAGCCTGGGATGCTTAAACCATGACCTTATTGTGTCCCTG11.639344262295082No Hit
GTTCCTGGAGAGGTTGTCGGGTACGTGGGAGGCCATCGGTGCCGCGTCAG11.639344262295082No Hit
CCATACCACCACACGTTATCGCGAGGCTGGGTGCGATCGGGAACCCCGAC11.639344262295082No Hit
GTCGCGACCCGCGCCGCCCTGGTCCGGATGCGCGACCTGGCCGTCGAGGC11.639344262295082No Hit
GCCTTCGACATGTCGGCATCGAGGGCTTTCTGGTTGATGGAGTTTTGGCT11.639344262295082No Hit
GGCCCTGCTCTTCGAGGTCGACCGGCTGGGCGAGGAGGACCTCGCGGATC11.639344262295082No Hit
CTCCAGACGCGCCCGGATCACCCCGAGTTCCGTCCCCTGGTGATGGAGGC11.639344262295082No Hit
GTCCCGTAAGCAGCGCAGGCAAGAGTTTGATGAGATGCAAGCACCGCTGG11.639344262295082No Hit
GTCATTAACACTGTGCGCGGACTGTCAGTGGGCACATACCTGCGCAGCCA11.639344262295082No Hit
GAACGGGAATCGACGTCGCCGATGGGCCGGGAAGAGGCGAGGGGATCGTC11.639344262295082No Hit
CTTTTGCACGATGCTGAACCTTTAACGACTCGGGTGACAATTTTCGACAC11.639344262295082No Hit
ATCCACTCCCAGATGAATCCACCATGCATGCGGTCACGGTGGAAGTGCGG11.639344262295082No Hit
GACCCGGCATGGCGTGGTCGTGGCCTGGCCGCCCCGGCGATGGCTGCCGT11.639344262295082No Hit
CCACACTGCCGGATGTGCGTATCACCACCGGCAGTGACGGTATGCACCGG11.639344262295082No Hit
AGCCAGTACATCCTCGGTGAACACCCGGTTACCGTCAACTGCCCAGTCGC11.639344262295082No Hit
GACAACGGCATCACAATCGCACGGATCCAACGGATGATTCGTGGCGAAGG11.639344262295082No Hit
CGATGATGATGCCGCTGATAGCGTTCGTGACACTCATAAGCGGGGTGTGG11.639344262295082No Hit
GTACTGGATTGCTTTGACAGCCCTGGCTGCTCTGTCGCTGCGTTGCAAAT11.639344262295082No Hit
GCCCATTGTCGCCATGATGTCGACGTGGATCCCGTGGTTCCGTTACGACG11.639344262295082No Hit
GGCTAGGTACTCCTCTGCCCCTCGTAGTGGCCAATATGACCGCAATTTCC11.639344262295082No Hit
CTCCATGTAGTGGGTGATCGTCCTCTGGGGACGGGCATCCCGCCGCCAGC11.639344262295082No Hit
TCCCACGTCGATCGACGTACTGTTGAAAAGTCTTCAATCTATTTCGCACC11.639344262295082No Hit
GTCTGAAGCTCTTAATTTGTGCGCGTACACCCTGGGTGAGCGTCTCGGAC11.639344262295082No Hit
GCTTTGCTATCATCTAACGATGCGCCGGGTCCCAACGGCAGCATGAAATC11.639344262295082No Hit
ACTAAGGCCACTGCTACAAATGATTGCAAGCAGCTCCGCTTCCCCATGAA11.639344262295082No Hit
CGAGACCTCTCCAGGCTCGACATCGACGCGGCAGTCGCAGCATGGCCCGA11.639344262295082No Hit
GATGTCGTTGTGCCCACTGTGGCGGTTCCCGAGGCGATGCCTCGATATGC11.639344262295082No Hit
GCACCCTGAGTGGCCGCCCAGGTGGACAGGTCCGCCAGGTCGGAAAAATC11.639344262295082No Hit
GTGCATTGGCGGCCCGAGGCCGGTACGAAGGCGATGGCACGATCCCTCAT11.639344262295082No Hit
GCTCTGGTCTACGCTGCCACCAGCCTGCCGTTCACTGTTTACCTGCTAGT11.639344262295082No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)