FastQCFastQC Report
Tue 10 May 2022
EGAF00003679796

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003679796
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences281781
Sequences flagged as poor quality0
Sequence length146
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT5180.1838307054059713No Hit
TGCCTGGACAGTGGCCCTGCAAGCAGCCAAGGATGGGGTCTCCACCACCT3330.11817688204669584No Hit
GGTTTACTGAGAGCATTAGGGGCAACAAGGGAGCCCTGGGCATCTGGGGA3050.10824008715988659No Hit
GTACATGGGAGTCTCGCGCCTGCAGCCCGTGCCGCCCCAGCCGCTGCCGC2890.10256191865313843No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)