FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003679961

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003679961
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59
Sequences flagged as poor quality0
Sequence length100
%GC60

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCAGTTGCCCACCCGCTGGATGTCGCCGAAGAGACCGACCTCGGTAGTCC35.084745762711865No Hit
CTTCTCGGCGATGCCAGCTTTCTCCTCCTCGGAAATGTTTTTGGCAACTG35.084745762711865No Hit
GTCCGGCTCAAGCTGAACCTGGTCGTGCTGGTGCTGGACGACGGCGCCTA35.084745762711865No Hit
GATCTCCTGTGCGACGTGGGAATTCCGTGTTCTGATGGCGAGCTCTCGCA35.084745762711865No Hit
ATTTGGCAGATTTTTCTGCCTTAAATGAGATTTTTGCGGCGCGCCTAACT23.389830508474576No Hit
TCCGAGGACCATGTCGTGGCGGACATGTTGCCTCTGAAATGGGTTGCCAT23.389830508474576No Hit
AACCGGTGCGCTGGACTACGAGCGCTCGACGGTGGTGGGCAACCAGAGCC23.389830508474576No Hit
GAAAGGGGACGTTCGTCGTCTCGCACAGCGACCCCCGGCAGTTTTATCGT23.389830508474576No Hit
GACCCCGACGCCCTGTGGACCGCCGTCTGGGCCCTCGTCCACGGCCTGGC23.389830508474576No Hit
CTCCGGACGAGCTTCGCGCGCTCATCGATGCCTTCCACAACGCCGGCATC23.389830508474576No Hit
GCCCTGGCGCATTTCGAGGAGAAGTTGTTCCGGTTGAAGGAGACGATGAA23.389830508474576No Hit
GGTTGGCAGTCGTGTCCAACTCCATGCAACGGCGGGTGGGAAAGCGATCC23.389830508474576No Hit
CTTCCAATCAAGGCAATTTTTATAACCATTCCATTAAGCAATTGATCGAG23.389830508474576No Hit
GGTTTTGGCAACAGCCCAGGGTCGCGTGAAGAAGTCGCGCCTGTCTGACT23.389830508474576No Hit
ATTATGAGGTCGGCCGGGTGGGCGTCGGCAAGCAAAAAATAGCCAAATGC23.389830508474576No Hit
GGCGTGGGAGCCTGCGCCGTGCGTCTCGATGACCGGGGCGCTCAGTGTGC11.694915254237288No Hit
GTGCTCCTGCTGGAGACCGGGCCGGAGTCGGGCCTCTTCGGCATCGCTGA11.694915254237288No Hit
GGTGCTAACGTCCGGACACGAGAGGGAAACAACCCAGACCGCCAGCTAAG11.694915254237288No Hit
TTCTTATGCTTCGCGAGTATCTGCGGCCAAATGTCGATGTCTTCCGGCAT11.694915254237288No Hit
GTATTGCAACAGCTGGGCGGCAACCGCGCTGCCGAGCACCTGAGGCGCAA11.694915254237288No Hit
CGATTCGGTGATCGTGGTGCGAAGCGAGTTGGCCTTCTACGCCGAGATGA11.694915254237288No Hit
CGCGCGCGGGCGTCACCACCCCAGACCCAGCCGCAGCGGCAGATACACCG11.694915254237288No Hit
ATTGTCCTGGGCGACCAGAAGCGCGATATGGATCATGATGAGGCTAAAGC11.694915254237288No Hit
TCCTAGTATGAGGCTGATTGTTCTTAGTCTTGAAATGTTTACAGCCACTG11.694915254237288No Hit
GTTCTGGAGGGTGGAAGTCCAAGATCAGGGTGCTGGCAAGGTTGGTACTT11.694915254237288No Hit
GGTTTAGCCCATGGAATTAATGATTGGACGGGTGGTGAAATCCCACGGCA11.694915254237288No Hit
ACACATGATCCGGGGTCACGCCGCGGTTTTTTGCACCCGTAAGCACGAGA11.694915254237288No Hit
CCACCAGGGTGAGTACTCGTCTTGACAGATTCCGCATCTCGTTTCTTGAA11.694915254237288No Hit
GGACAGCAGCGCGCCGAGCGCGAAGCCGATCGCGGTCGTCCAGCCGAGCG11.694915254237288No Hit
GGCCAGGTCACGGCCGAGCACCTCATCTGGTGCACCGGTTTTCGCCCCGC11.694915254237288No Hit
CCCCCGGACAGGCGAAGCAGAGCGACCCGAGCAGTGGGGCAACAGCGGCA11.694915254237288No Hit
GAGCCATCCACCACCAAGCCCACCACTGAGAAGGAGGCATAAGACATGCC11.694915254237288No Hit
GAAAACCCCGAACGCTCTCAGCTCATCGCGCTCACCCTCAAAGTCGGAGA11.694915254237288No Hit
GGCCAGCCAGTCATGGGAAGTTGCACTATGGCACTCGGCAGGAGGCGACT11.694915254237288No Hit
CCCCCACAGGCGCCAGGTCCGCGGCTGACGCGGCGGCGGCACGCTCGAGC11.694915254237288No Hit
AAACGGTAGCTGCGGTCGAACCTGAGGTCACCGTTGAGCATAACCACGCT11.694915254237288No Hit
ACCTGCACTACCAGGTGTTCTGGGGGCGTTCGCGTTCGTACTTCGCGGCG11.694915254237288No Hit
TCACCGTCTCGTACAAGCAGCAGTACGGCATCGAGACCCGCATCGCGCGC11.694915254237288No Hit
CTCAACCGCCTGATCGAGCTGCAGATGGAGGGCGCGGTCGGCTGATCGCC11.694915254237288No Hit
AGTCGTGTCTTATGGTCTCCACGCCCAGTCCTCCGATATACATTATAGTC11.694915254237288No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)