FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003679962

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003679962
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59
Sequences flagged as poor quality0
Sequence length100
%GC61

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGGAGCCGCCGGCCCGCCGGGTTACCGATCTTGATCGCCAACGAGCCGC35.084745762711865No Hit
TGCGGACGACATCAACCTCAACGAGGTCCACAGTGATTGGAACGAGGAAG35.084745762711865No Hit
CGCTGTAGTCGATCGGCGTGGCGACGAGGTGGACGCCGCCGGCCGCGAAG35.084745762711865No Hit
ATTTCGACCACCGCACCTTTTGGCAAGGCGGCCACTTGCACCGCGGCACG23.389830508474576No Hit
CAGCCGCTCTTCGGCACGCACCATGCGCACGCCGAAACGGGTTTCGAAAA23.389830508474576No Hit
GTACAAGGCGTTGGCCACGAGGAAGTTGCGTACCTCATTGCGTCCGAAGT23.389830508474576No Hit
CCCTCACGCGTCACATTCGCCAGGGAAACGCCACCCGTCGCGGTGAGCAG23.389830508474576No Hit
GGTCGAAGGCGAGACCTCGATCCTGAACGGAGGCGAGTTCGCGCCGAAGT23.389830508474576No Hit
GACATGCCGACGCCGTTACCTCGCATCACCTGGCACGAGGCGATGGATCG23.389830508474576No Hit
CTCACCAACCGAGAAACCCGGCAGCTCATCAGGTCTGGTACGTATGGCTC23.389830508474576No Hit
TGGCCAAGGAATGCCTCCGGCAGTGAGTCAATGAGATCGGCGCACTCGGC23.389830508474576No Hit
AGGTCGGGCAAGTCTAGCCAAAGACGATCTGTTGCATCGTACTTCGACGC23.389830508474576No Hit
GTATTCCTTCATAGCGGTGCGCTTGCCATAGCCGCCGCTGGTGGCAACCA23.389830508474576No Hit
GCGTCGGCTCGGTGGTGCTGGTGTGGATCATGCTCACCGTGACCTCGTGG11.694915254237288No Hit
GTATTTTTCCAAAGTCGTCTGAAAGAGCCTCGGTCGTCTGATTGCCGTTG11.694915254237288No Hit
ATTTTAACCCATCCAGAAACGAAATTTCGCCCCAGCCTTCACGCCTGTGA11.694915254237288No Hit
GCTTTCTAGAGCGATGGCCCTCTCCCGCTGGCAGCTGCGATGGATACCTA11.694915254237288No Hit
ATTTTAACCCATCCAGAAACGAAATTTCGCACCAGACTTCACGCCTGTGA11.694915254237288No Hit
AGGAAAGACTATGTGAGGAAACAGCAAAAAGGTGGCAATGTGCAACCCCC11.694915254237288No Hit
ATGGTGAATGTCTGAATTAAAGGAGCGCACATGAGCAACGTCGAGAAGAC11.694915254237288No Hit
CTGGTGGGAGTACGTGGCGGCGCAGTTCGGGTGCTGCGGCGGCGACGGGG11.694915254237288No Hit
CTGCTGGCCGTCGCCGTACACGGTGATCGGCTTGCCCTTCATCGCCTGCA11.694915254237288No Hit
ATGTGGGATCAGCCTGAACTTGCATCAATTCAGCGACGCTGGCGTGCTAT11.694915254237288No Hit
CCGCCATAGGGGGAATCGTCGACGGCTTGGTGGACGCCGGTGGCCCACTG11.694915254237288No Hit
GATAAACTGCTCTGTTGGCTTGAATGTACATTGCAGGATTTTGCTGGATG11.694915254237288No Hit
GAAATAAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAAT11.694915254237288No Hit
GATCCACACTTGGCAGGACGCGCGGCTCTACGCGGCGGTCGCCGGGGCGG11.694915254237288No Hit
GACATGACGACGCCGTAACCTCGCATCACCTGGCACGAGGCGGTGGATCG11.694915254237288No Hit
GGGCCGACCACACGAGCGATCCATTCCTGCTCACCGCCCTCCTCGAAGAA11.694915254237288No Hit
CTGGGAACCACCGCCACGTCGGCATTGGCGCCAGGAAGTATGGTAGCCAC11.694915254237288No Hit
CCTGGACCTGTACCAACAAGGGGGGTAACTCCTTGTTGGTACAGGTCCAG11.694915254237288No Hit
TTCTTCCTCCGTGCCGGAATCTCGCCACGAAACTGTCACTATCTCCGGAA11.694915254237288No Hit
GGCATCGTCGGCGTGGTCCTGTTCGTCATCATCGGGCTGGTCCCGGCGCT11.694915254237288No Hit
ACCGGACTGCTCGCCTCCATGGCCTTGCTGATCCAGGTGTTCATGATGTC11.694915254237288No Hit
CAGTTGCCCTCAGCGATGCCGAAGAGGCCCGACTCCGGCCCGGTCTCCAG11.694915254237288No Hit
TTCTTCCTCCGTGCCGGAATCTCGCCACGAAACTGTCACTAGCTCCGGAA11.694915254237288No Hit
GTGCAGTGGCGTCTGCAATCTCAATTGCGCTTATAGCGACAATGGCCTCA11.694915254237288No Hit
ACCACCCTCGACATGCAGGCACCGATCGTGACCACCGGCAAGGGATCGCG11.694915254237288No Hit
GTCGAAGGTCAGATTGGCCTCGTACGAGACCTCTTTCCCCGGGTTAAGGT11.694915254237288No Hit
TTACGAGGGCGATGCGGCAGGCGATCTCACCGCCGCGTGGACTGCGGATG11.694915254237288No Hit
GCCAAAGCCAAAGCGAAGGGCGGCGACGAAGCCGCCACCGCCGAAGCGAC11.694915254237288No Hit
GTCCGTCACCCTGGAAGAGAAGTCCCGCTACACCGTGGTGGTCGAAGCGG11.694915254237288No Hit
ATCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAAC11.694915254237288No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)