FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003680047

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003680047
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31
Sequences flagged as poor quality0
Sequence length100
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCGAATCGGGGGGCGAACAGCTCACTGATCTCGTCCAGACCATCCGCCC39.67741935483871No Hit
GATGTTGTGGTGCGGCCGGGACGACGAGCCGCACAAGCACGACCGCGTGG39.67741935483871No Hit
CGCCACCGGCCGGATCGGGCTCGACCCCCACCGCGGTGTTGACGGTACCG26.451612903225806No Hit
ACCTTCGTGCGCCCGGGTGTCCACGACTACGCGGAGGTGCACACCCCGAA26.451612903225806No Hit
GTACGGCTACCTTGTTACGACTTAGTCCTAATCACCAGTCCCACCTTCGA26.451612903225806No Hit
CCCGGATCGGGATGTGCATGCCGTACGCCGTGGCCGCGTCGACCACGTCC13.225806451612903No Hit
ATTCCACGGTCTGGTCGGCGCCGACGGCTTCGCTCCGTGGTTCGCCCAGG13.225806451612903No Hit
GTCAAAGGTAATCGCTTTGTCGAAGACGGATGTGGCAAAGTCGATATAGG13.225806451612903No Hit
ATCTCCATGTCGCTCGGGTTCGATTTTCCCGGTCTGGTGCAGCAGCTGGT13.225806451612903No Hit
CCGCTAAACTCATTGGGATTCCCCTTTCCGCAGTAAGGTTGATGTGCTCT13.225806451612903No Hit
GGTGCGCAGCATGTCCGGGGTGGACACGTAGAGCTGGTTGCCCTCGCCGA13.225806451612903No Hit
ACGTGGCGCTGACTGCTCGCGAGGCGCTGGCAAAGATGGCGCACATGGCG13.225806451612903No Hit
CCGCCACCTGGCCGTAGGAGACCTCCATCACCGTGCCGCCGGTGAACTCG13.225806451612903No Hit
TAGTCGCTGCGGGTGAAGAAAGTGTCACGGTTGCAGAGAGCCACAGACAT13.225806451612903No Hit
TTTCTTCTCATTTTGCTGCGTGTGTGAGATGTAGACTCTCGTTGATATTG13.225806451612903No Hit
TTTTCCAGGTTCCCCTCCAGCCGAGCTTCCGTATCGTCTATTTAGGCTTA13.225806451612903No Hit
ACGCAAGAGACACTGATGGGCGCAAAGAGACAATGGCCCATCCTTTCTTT13.225806451612903No Hit
GGAGAAGAGGGACCCACGTAGGTAGATAAAAGGAAGGAAGGACGCGACGG13.225806451612903No Hit
GAGGAGGGCAGTCGGGGTTCCGCTGATCCTCACCGCGTCCACCTCGCTCT13.225806451612903No Hit
CCTTTGGGACTCCTCTCCTTCCTAGGTCCTCCATTAGAACATCCATAGCG13.225806451612903No Hit
CATCGGCATCACCCACTACGACCCCAGCGAGGAAGAGCAGCTGCTGCGCG13.225806451612903No Hit
CATCGAGCCCTCCTCCATCTTGGCGTCGGAGGCGCCGGTGGCGAGGAGGA13.225806451612903No Hit
ACGTGGCCTCGTGCGCGTGCCGCTCCGCGGAGCCCGGCGGCGCCAGGCGG13.225806451612903No Hit
GAGCCAGTCTCGGTCGTCATTCATCTTCCGTTCGGGGGGAGGACGGCGTC13.225806451612903No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)