FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003680048

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003680048
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31
Sequences flagged as poor quality0
Sequence length100
%GC62

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGCGCTTGGTGCGGGTCAGCCGCTCCCGGTAGTCCGCTGCGGAGGCCGC39.67741935483871No Hit
TCTTGGAGCAGTCGCTCCATGTGCGGCATTACGGGAGCTCCCGCTCTGGA26.451612903225806No Hit
CGCGAACGCCCCGTGCACACCGGTGTGCCCGAGGATGAGCGGTGCCGGCA26.451612903225806No Hit
GTAGCTTCACTTTAGCCTAGACCAGGTAGGTAGACTGACTTTGGCTTTTC13.225806451612903No Hit
GGGGTTTTTTTCTTCCGCCGTCCCTCCGTCGCGTCGTTCCTTCCTTTTAT13.225806451612903No Hit
GGATAATAGGGATGTGCAAATCGGAGGATCTTACCAAGATGGCGGAAATT13.225806451612903No Hit
GAGTCCCTACCAGCGCACAGCGTTCCGGCAAGCCCGCGACCGGTACCAGG13.225806451612903No Hit
GCGCTCGGCGATGCGCCGGTCGGTCTTGGCCAGGGACATCTCGATGTTGT13.225806451612903No Hit
GCTTGGAGCAGTCGCTCCATGTGCGGCATTACGGGAGCTCCCGCTCTGGA13.225806451612903No Hit
CTTATGTCCAGGGCTTCACGCATGCTAAAATGGCTGGTACAGAGAGTGGC13.225806451612903No Hit
ATTTATAGCCAGAAAAACGCATAAAAATTGCGCTGAAGTTGCGCATTTGA13.225806451612903No Hit
GAATACGACTCTCCTCCTGACTTCATGCTATTCGGGAGGCTGGTTAGTTC13.225806451612903No Hit
NGCCCGGCGACGGCACGCCGCACGCGGGCGCGGCGCTCCACCTGTTCGCC13.225806451612903No Hit
CATTGCCCAGCGTGTGGTCCTCGTCACGCAGGTTAAACGTGCACGCCGAC13.225806451612903No Hit
GACGTGTCGCTGCTGGCCAAGCTCGACCAGGTGCTCAACGACCTGGGCTT13.225806451612903No Hit
GACTACCAGGTCAGCCAGTACGACGTGCCGATCAACGCCGACGGCTCCCT13.225806451612903No Hit
CCAGCTGCTCGCGCAGCAGCTGCTCTTCCTCGCTGGGGGCGGAGTGGGTG13.225806451612903No Hit
CCGGCGAGAAGACGATTCGCATGCACTACGCCAACTGCAACACCTACAAC13.225806451612903No Hit
GGCCAGTTCTGCTCGACCAGCTGCTGCACCAGACCGGGAAAATCGAACCC13.225806451612903No Hit
CACCGTGGGCCGCAGCCCGCACGTCCCCGTGACCCCGGCCGCGATCGCCG13.225806451612903No Hit
ATATTGCGGCTCGTTGTGATACAGCTACCCTCGCCGTGGCTTCGAGCCGC13.225806451612903No Hit
GACGTGTCGCGGCTGGCCAAGCTCGACCAGGTGCTCAACGACCTGGGCTT13.225806451612903No Hit
GGGTAGGATTGGAATTTCACTGGACCGTGCTTGTTTTATCGGTCGGCTCT13.225806451612903No Hit
TCGCTCCCGTCGGTGGCGAGCCGCCGATCTCGTCCGACCCGCCGTTCCAC13.225806451612903No Hit
GGTGACCTTCCTGCTCGCGGTGGGCCTGCTCGCCACGCGCGGGCTGCACT13.225806451612903No Hit
GTGGCGGGGTCTTGTCTAGTCCGATCGGACCTGTTACGTCCAAGGGCCAC13.225806451612903No Hit
CTTATGTCCAGGGCTTCACGCATGCTACAATGGCTGGTACAGAGAGTGGC13.225806451612903No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)