FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003680149

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003680149
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2369
Sequences flagged as poor quality0
Sequence length100
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT130.5487547488391726No Hit
CTCCTGCACCTGCGCCGGCTCCTGCAAATGCAAAGAGTGCAAATGCACCT100.42211903756859437No Hit
GTCCCAGCATCAGGCGCAGCAGCTGCACTTGTCCGACGCCCCTTTGCAGA90.3799071338117349No Hit
GTCCCGACTCTAGCCGCCTCTTCAGCTCGCCATGGATCCCAACTGCTCCT90.3799071338117349No Hit
CTCCAAGTCCCAGCGAACCCGCGTGCAACCTGTCCCGACTCTAGCCGCCT80.33769523005487545No Hit
GTTTTATTATCATTCACATTATTTCATAGAAAAAGGAATATAGCAAACGG70.29548332629801605No Hit
GGTCAGGGTTGTACATAAAAAATCCAGGTTTGTGGAAGTCGCGTTCTTTA70.29548332629801605No Hit
CTTTACATCTGGGAGCGGGGCTGTCCCAGCATCAGGCGCAGCAGCTGCAC70.29548332629801605No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC60.2532714225411566No Hit
GCCCACAGGGCAGCAGGAGCAGCAGCTTTTCTTGCAGGAGGTGCATTTGC60.2532714225411566No Hit
GTATCAACGCAGAGTACATGGGACGCCTCCTCCAAGTCCCAGCGAACCCG60.2532714225411566No Hit
CCTCCAAGTCCCAGCGAACCCGCGTGCAACCTGTCCCGACTCTAGCCGCC60.2532714225411566No Hit
ACGCAGAGTACATGGGACGCCTCCTCCAAGTCCCAGCGAACCCGCGTGCA60.2532714225411566No Hit
ACATCTGGGAGCGGGGCTGTCCCAGCATCAGGCGCAGCAGCTGCACTTGT50.21105951878429718No Hit
CGCCTCCTCCAAGTCCCAGCGAACCCGCGTGCAACCTGTCCCGACTCTAG50.21105951878429718No Hit
CCTGTGGGCTGTGCCAAGTGTGCCCAGGGCTGCATCTGCAAAGGGGCGTC50.21105951878429718No Hit
GCCCTGGGCACACTTGGCACAGCCCACAGGGCAGCAGGAGCAGCAGCTTT50.21105951878429718No Hit
AAGGAATATAGCAAACGGTCACGGTCAGGGTTGTACATAAAAAATCCAGG50.21105951878429718No Hit
GGGTCAGGGTTGTACATAAAAAATCCAGGTTTGTGGAAGTCGCGTTCTTT50.21105951878429718No Hit
CTCCGGCCCCGGCCGGGGGGCGGGCGCCGGCGGCTTTGGTGACTCTAGAT40.16884761502743773No Hit
GATCCCAACTGCTCCTGCGCCGCCGGTGACTCCTGCACCTGCGCCGGCTC40.16884761502743773No Hit
GTGCCAAGTGTGCCCAGGGCTGCATCTGCAAAGGGGCGTCGGACAAGTGC40.16884761502743773No Hit
CCACATGAAGCCGTGGCTGGCATGGAGAGCCTCCTCTGTGGTGCGCAGCC40.16884761502743773No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG40.16884761502743773No Hit
GTCTAGGGACAGGAAGATGGTTGGCGACGTGACCGGGGCCCAGGCCTATG40.16884761502743773No Hit
CCGCCATGGAACTCAGCGCCGAATACCTCCGCGAGAAGCTGCAGCGGGAC40.16884761502743773No Hit
GTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCC40.16884761502743773No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGGA40.16884761502743773No Hit
GTATCAACGCAGAGTACATGGGACTGGCTGCTCTGAAAAGCCATCTTTGC40.16884761502743773No Hit
ATGCAGCCCTGGGCACACTTGGCACAGCCCACAGGGCAGCAGGAGCAGCA40.16884761502743773No Hit
CATCAGGCACAGCAGCTGCAGTTCTCCAACGTCCCTTTGCAGACACAGCC40.16884761502743773No Hit
GCTTTTCTTGCAGGAGGTGCATTTGCACTCTTTGCATTTGCAGGAGCCGG40.16884761502743773No Hit
GATCAGCTCTGCCCTGCCCACCCCATCTCAGCCAGGCGGCTTTACTTCTT40.16884761502743773No Hit
ATCCAGGTTTGTGGAAGTCGCGTTCTTTACATCTGGGAGCGGGGCTGTCC40.16884761502743773No Hit
CAGCTGCACTTGTCCGACGCCCCTTTGCAGATGCAGCCCTGGGCACACTT40.16884761502743773No Hit
GTCTTTACGTGGGTACTTGCGCTTACTTTGTAGCCTTCATCAGGGTTTGC40.16884761502743773No Hit
GCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGG40.16884761502743773No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT40.16884761502743773No Hit
GTTGTACATAAAAAATCCAGGTTTGTGGAAGTCGCGTTCTTTACATCTGG40.16884761502743773No Hit
CCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCT30.1266357112705783No Hit
GGGCAGCAGGAGCAGCAGCTTTTCTTGCAGGAGGTGCATTTGCACTCTTT30.1266357112705783No Hit
AAATACAACTGCGACAAGATGATCTGCCGCAAGTGCTATGCTCGCCTTCA30.1266357112705783No Hit
GGTAGGCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCGAATG30.1266357112705783No Hit
GCATTTATCAGATCAAAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCC30.1266357112705783No Hit
GCCCGTAGCTGACTCAGCTTCCTCATCTTCATCTCCATCCTCTTCCTCAC30.1266357112705783No Hit
GGCCCCTGCTGGGACCAGAGTTCCAAGGCCTCTGCTCAGGATGCAGGGGA30.1266357112705783No Hit
CTACCATGGTGACCACGGGTGACGGGGAATCAGGGTTCGATTCCGGAGAG30.1266357112705783No Hit
CATCTTCATCAAGGTCTTTGTACTTTTCTAAGTCCTTACGGAATGGCAGT30.1266357112705783No Hit
GTGCCTGTGCCGGCTCCTGCAAATGCAAAGAGTGCAAATACACCTCCTGC30.1266357112705783No Hit
GCAGCAACGCGAGTGGGAGCACCAGGATCTCGGGCTCGGAACGAGACTGC30.1266357112705783No Hit
GTAGGAATAGGGATAACTGTTTTGACTCTAGGTATTGTGTGATGTTGTTA30.1266357112705783No Hit
GACCACGCCTCCTCCAAGTCCCAGCGAACCCGCGTGCAACCTGTCCCGAC30.1266357112705783No Hit
ATTTGACTCAGAGAGGACCCCCAGAGGGTGTCTCCATCTTCCCTATTTAT30.1266357112705783No Hit
GCCCGAGGTTATCTAGAGTCACCAAAGCCGCCGGCGCCCGCCCCCCGGCC30.1266357112705783No Hit
TCCTCCAAGTCCCAGCGAACCCGCGTGCAACCTGTCCCGACTCTAGCCGC30.1266357112705783No Hit
CGTGACCGGGGCCCAGGCCTATGCCTCCACCGCCAAGTGCCTGAACATCT30.1266357112705783No Hit
CCCTGCCCACCTCTCCTGTCTCCCTCCCACCCCATAATTCTGCCAGCTCT30.1266357112705783No Hit
GTGCAAATGCACCTCCTGCAAGAAAAGCTGCTGCTCCTGCTGCCCTGTGG30.1266357112705783No Hit
TAAGAAAGCTGCCTATTGGCTGGAGGGAGAGGCTTAGGCAGAAGCCCTAT30.1266357112705783No Hit
GTCACGGTCAGGGTTGTACATAAAAAATCCAGGTTTGTGGAAGTCGCGTT30.1266357112705783No Hit
GTATCAACGCAGAGTACATGGGAGTGCCCCAGGCGGCGAGGAGAGCGGTG30.1266357112705783No Hit
CTCCTCTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCG30.1266357112705783No Hit
GCATCGGATCACCGGCGTGCCCCACCATGTCAGACGCAGCCGTAGACACC30.1266357112705783No Hit
GTTCTACATTTTCAAAGCCTCTTTCGTTACTCATCTGCCCTGCAGATTCC30.1266357112705783No Hit
AGCTGCACTTGTCCGACGCCCCTTTGCAGATGCAGCCCTGGGCACACTTG30.1266357112705783No Hit
CTCTTTGCATTTGCAGGAGCCGGCGCAGGTGCAGGAGTCACCGGCGGCGC30.1266357112705783No Hit
GTTTAAAGCAGTACAAGTCCAGCGGAGAAAAAAAGTAACTTTCGAAAAAC30.1266357112705783No Hit
GTACATGGGGTCGCAGAAGTACGAGCTGGGCGCAGCGCTGTACATCGGCT30.1266357112705783No Hit
CCAGACGCCATGAAAGCTGCCATGGCCCTGGAGAAAAAGCTGAACCAGGC30.1266357112705783No Hit
GTACATAAAAAATCCAGGTTTGTGGAAGTCGCGTTCTTTACATCTGGGAG30.1266357112705783No Hit
GTACATGGGTCCACGCCTCCTCCAAGTCCCAGCGAACCCGCGTGCAACCT30.1266357112705783No Hit
ACTCTAGCCGCCTCTTCAGCTCGCCATGGATCCCAACTGCTCCTGCGCCG30.1266357112705783No Hit
GTATCAACGCAGAGTACATGGGAAGGCCAAGAGGCACACGGAGGGAAAGC30.1266357112705783No Hit
GCCCACAGGGCAACAGGAGCAGCAGCTTTTCTTGCAGGAGGTGCATTTGC30.1266357112705783No Hit
AGACTGCACGGATTGTTTTAAGAAAATGGCAGACAAACCAGACATGGGGG30.1266357112705783No Hit
AATGCAAAGAGTGCAAATGCACCTCCTGCAAGAAAAGCTGCTGCTCCTGC30.1266357112705783No Hit
CTTCAGCTCGCCATGGATCCCAACTGCTCCTGCGCCGCCGGTGACTCCTG30.1266357112705783No Hit
CTCGCTATCTTGCTCAAGCTGATCTCGAACTCCTGGGTTCGATCAATACT30.1266357112705783No Hit
ACGCAGAGTACATGGGACCACGCCTCCTCCAAGTCCCAGCGAACCCGCGT30.1266357112705783No Hit
GTTGAATCCTGTTTAACATGCTTTCAAAAGTTATTTTATAATTTAATTTG30.1266357112705783No Hit
GTTCTCTTCTCTGCAGGGCGAGGGGCAGGGAGCTAGTAGAACCTCGCAAT30.1266357112705783No Hit
GAACATCCTTCTGTAAGCCTTGCTTTTCCTCCTGTAGGCTGGCAGAGGAC30.1266357112705783No Hit
CCGAGGAGATGGAGCTGTACGAGCTGGCGCAGGCGGCGGGCGGCGCTATC30.1266357112705783No Hit
TGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGGCGCTGACC30.1266357112705783No Hit
CCATGGTAGGCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCG30.1266357112705783No Hit
GCTCCTGCGCCGCCGGTGACTCCTGCACCTGCGCCGGCTCCTGCAAATGC30.1266357112705783No Hit
CAACTGACTGAAGAGCAGATTGCAGAATTCAAAGAAGCTTTTTCACTATT30.1266357112705783No Hit
GGGCCGGAGAGGGGCTGACCGGGTTGGTTTTGATCTGATAAATGCACGCA30.1266357112705783No Hit
GGTCAGGGTTGTACATAAAAAAATCCAGGTTTGTGGAAGTCGCGTTCTTT30.1266357112705783No Hit
CCTCTTCAGCTCGCCATGGATCCCAACTGCTCCTGCGCCGCCGGTGACTC30.1266357112705783No Hit
GTATCAACGCAGAGTACATGGGACCACGCCTCCTCCAAGTCCCAGCGAAC30.1266357112705783No Hit
TACCAGCCCAGTGAACCCAGCTGTCTTCCCCCATCTGACCGTGGTGCTTT30.1266357112705783No Hit
GTACGGGCACCTCGCTGGCGCTCTCCTCCCTCCTGTCCCTGCTGCTCTTT30.1266357112705783No Hit
ACACCACTCCCAAGAAGAATAAGCACAAGAGAAAGAAGGTTAAGCTGGCT30.1266357112705783No Hit
GATCAAAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCCGGGGGGCGGG30.1266357112705783No Hit
GACATGGGGGAAATCGCCAGCTTCGATAAGGCCAAGCTGAAGAAAACGGA30.1266357112705783No Hit
GGCCTCCTCGTGGCCATCTTCCACAAGTACTCCGGCAGGGAGGGTGACAA30.1266357112705783No Hit
GAGGAATTTGAAGTAGATAGAAACCGACCTGGATTACTCCGGTCTGAACT30.1266357112705783No Hit
GGAGAGGGGCTGACCGGGTTGGTTTTGATCTGATAAATGCACGCATCCCC30.1266357112705783No Hit
GAGTACATGGGACGCCTCCTCCAAGTCCCAGCGAACCCGCGTGCAACCTG30.1266357112705783No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)