FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003680150

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003680150
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2369
Sequences flagged as poor quality0
Sequence length100
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCCCAGCATCAGGCGCAGCAGCTGCACTTGTCCGACGCCCCTTTGCAGA160.6753904601097509No Hit
GGTCAGGGTTGTACATAAAAAATCCAGGTTTGTGGAAGTCGCGTTCTTTA130.5487547488391726No Hit
GATCCCAACTGCTCCTGCGCCGCCGGTGACTCCTGCACCTGCGCCGGCTC120.5065428450823132No Hit
GCCCACAGGGCAGCAGGAGCAGCAGCTTTTCTTGCAGGAGGTGCATTTGC110.4643309413254538No Hit
CTCCAAGTCCCAGCGAACCCGCGTGCAACCTGTCCCGACTCTAGCCGCCT90.3799071338117349No Hit
GACCACGCCTCCTCCAAGTCCCAGCGAACCCGCGTGCAACCTGTCCCGAC70.29548332629801605No Hit
CTTTACATCTGGGAGCGGGGCTGTCCCAGCATCAGGCGCAGCAGCTGCAC70.29548332629801605No Hit
GTCCCGACTCTAGCCGCCTCTTCAGCTCGCCATGGATCCCAACTGCTCCT70.29548332629801605No Hit
GGGTCAGGGTTGTACATAAAAAATCCAGGTTTGTGGAAGTCGCGTTCTTT70.29548332629801605No Hit
GTACATGGGACCACGCCTCCTCCAAGTCCCAGCGAACCCGCGTGCAACCT60.2532714225411566No Hit
TATCTAGAGTCACCAAAGCCGCCGGCGCCCGCCCCCCGGCCGGGGCCGGA60.2532714225411566No Hit
CACTTGGCACAGCCCACAGGGCAGCAGGAGCAGCAGCTTTTCTTGCAGGA60.2532714225411566No Hit
GCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAAT50.21105951878429718No Hit
CCAAGTCCCAGCGAACCCGCGTGCAACCTGTCCCGACTCTAGCCGCCTCT50.21105951878429718No Hit
CCTCCAAGTCCCAGCGAACCCGCGTGCAACCTGTCCCGACTCTAGCCGCC50.21105951878429718No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGGATGCGTG50.21105951878429718No Hit
GCCGCCAGCGCCCGCCCCCCGGCCGGGGCCGGAGAGGGGCTGACCGGGTT50.21105951878429718No Hit
TATCAACGCAGAGTACATGGGACGCCTCCTCCAAGTCCCAGCGAACCCGC50.21105951878429718No Hit
GTTCCTCATCCGCCTCCTTGCTCGCCGCAGCCGCCTCCGCCGCGCGCCTC40.16884761502743773No Hit
GTTTTATTATCATTCACATTATTTCATAGAAAAAGGAATATAGCAAACGG40.16884761502743773No Hit
GGCCCATCGACTACAAACGGAACTTGCCGCGTCGAGGACTGTCGGGCTAC40.16884761502743773No Hit
GTCAGGGTCAGGGTTGTACATAAAAAATCCAGGTTTGTGGAAGTCGCGTT40.16884761502743773No Hit
TCCTCCAAGTCCCAGCGAACCCGCGTGCAACCTGTCCCGACTCTAGCCGC40.16884761502743773No Hit
GCATCAGGCGCAGCAGCTGCACTTGTCCGACGCCCCTTTGCAGATGCAGC40.16884761502743773No Hit
ATGTTTATTGTGATCCAGTCTTCAACACAAACAGAAGTGCTTTTTAGGCT40.16884761502743773No Hit
ATGCAGCCCTGGGCACACTTGGCACAGCCCACAGGGCAGCAGGAGCAGCA40.16884761502743773No Hit
GGGTTGTACATAAAAAATCCAGGTTTGTGGAAGTCGCGTTCTTTACATCT40.16884761502743773No Hit
GGCCTCAATGATGCCTCCTGATCTATCGCTGGGCCTGGACGACCAACACT40.16884761502743773No Hit
CGTGCAACCTGTCCCGACTCTAGCCGCCTCTTCAGCTCGCCATGGATCCC40.16884761502743773No Hit
CACCTGCGCCGGCTCCTGCAAATGCAAAGAGTGCAAATGCACCTCCTGCA40.16884761502743773No Hit
GTCCTCTGCTATCTCTACTGGTTTTTGCAGCTTTTTCTTCCCTCTCCTCT30.1266357112705783No Hit
GCTTTTATGTCATCTTGAGTAAGTTTCTGAGATTTCCCATCATCAACTAT30.1266357112705783No Hit
TGCCTCAGTAGCTGGGACTGCAGGCACCAGCCACCACACCTGGTTAATTG30.1266357112705783No Hit
GGGCAGCAGGAGCAGCAGCTTTTCTTGCAGGAGGTGCATTTGCACTCTTT30.1266357112705783No Hit
AACCCGCGTGCAACCTGTCCCGACTCTAGCCGCCTCTTCAGCTCGCCATG30.1266357112705783No Hit
ATTACCCACCACTGGATTTGACTCAGAGAGGACCCCCAGAGGGTGTCTCC30.1266357112705783No Hit
CGCTTGAGCCATCCCGGCTCATGGCCAGAGCAATAGCGTCTGTGGTGAAG30.1266357112705783No Hit
TTTCCATTTGGTCCAAGGCTTGTTAGGATAGTTAAGAAAGCTGCCTATTG30.1266357112705783No Hit
GCCCGAGGTTATCTAGAGTCACCAAAGCCGCCGGCGCCCGCCCCCCGGCC30.1266357112705783No Hit
CTCCTGATCTATCCATAGGCCTGGAAGATCAGCACTGGGATGACGATGAG30.1266357112705783No Hit
ATCCTATTCTAGAGTCCATATCAACAATAGGGTTTACGACCTCGATGTTG30.1266357112705783No Hit
CTCCTGGAAGTTCACCTCCTGGTCCTTGTTCCGGTCCAAGTCTTCCATCA30.1266357112705783No Hit
GTGTAGGGCTCTTCCCAGGCCCGCCCCCCTTGGGCAGCCTGGTAGCGCTG30.1266357112705783No Hit
CTCCTGCACCTGCGCCGGCTCCTGCAAATGCAAAGAGTGCAAATGCACCT30.1266357112705783No Hit
GCTCAAGGATGTGGGCTCTCTTGATGAGAAGATGAAGAGCTTGGATGTGA30.1266357112705783No Hit
GTGCAGGAGTCACCGGCGGCGCAGGAGCAGTTGGGATCCATGGCGAGCTG30.1266357112705783No Hit
GTCACGGTCAGGGTTGTACATAAAAAATCCAGGTTTGTGGAAGTCGCGTT30.1266357112705783No Hit
GTACATGGGCCTTTCCGGCGGTGACAACCTACGCACACGAGAACATGCCT30.1266357112705783No Hit
AACAAAAGGAACTCCCAAATGAATCACAGGAGCAATGTTAACTTGTCTTT30.1266357112705783No Hit
AGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTC30.1266357112705783No Hit
CATGTCCTGTAACTCTGCTTCTGTGGGATTCTGCCCAAGAGATCTCATTA30.1266357112705783No Hit
CTCACACGTAGATGCCAACCCAGAGCAGCAGGAAGAGGACTCCAAAGCCC30.1266357112705783No Hit
GAGCGGGGCTGTCCCAGCATCAGGCGCAGCAGCTGCACTTGTCCGACGCC30.1266357112705783No Hit
GTACATGGGAGAGCGCCGCGGCCCCGAGATGAAGCCGGCGGTGGACGAGA30.1266357112705783No Hit
GCATGATGGTGGTGGGTACGGGCACCTCGCTGGCGCTCTCCTCCCTCCTG30.1266357112705783No Hit
TCCCAATGGTGCAGCCGCTATTAAAGGTTCGTTTGTTCAACGATTAAAGT30.1266357112705783No Hit
ACGCAGAGTACATGGGACGCCTCCTCCAAGTCCCAGCGAACCCGCGTGCA30.1266357112705783No Hit
AAGTCCAAGCATAGCAACAGTGAACATAAAGATTCTGAAAAGAAACACAA30.1266357112705783No Hit
GGGCCAGGCTGTGCTAGATGGCGCCTGGAAGGGGGGTCACCCAAGTCTCC30.1266357112705783No Hit
GATCAGGCCATTGGCCTCCTCGTGGCCATCTTCCACAAGTACTCCGGCAG30.1266357112705783No Hit
CTCTTCCTCTGAGCGGTCATGGACTCGATTTTCATCATTAATGGAGTAAT30.1266357112705783No Hit
ATCCACATCCGCAGCGAGACCTCCGTGCCCGACCATGTCGTCTGGTCCCT30.1266357112705783No Hit
CACTTGGCACAGCCCACGGGGCAGCAGGAGCAGCAGCTCTTCTTGCAGGA30.1266357112705783No Hit
GACTCAGAGAGGACCCCCAGAGGGTGTCTCCATCTTCCCTATTTATTTTC30.1266357112705783No Hit
CTTCAGCTCGCCATGGATCCCAACTGCTCCTGCGCCGCCGGTGACTCCTG30.1266357112705783No Hit
CTTGAGGGCTTCATTGTAGATCAAAGCCAAGGCCCCCAGGAAGGTGACAT30.1266357112705783No Hit
GTGCAATGGCACGATCTCAGCTCACTGCAACGTCTGCCTCCCAGGTTCGG30.1266357112705783No Hit
GGGGGGATGCGTGCATTTATCAGATCAAAACCAACCCGGTCAGCCCCTCT30.1266357112705783No Hit
ACGCAGAGTACATGGGCAGTTGACACAAAATAGACTACGAAAGTGGCTTT30.1266357112705783No Hit
GTATCAACGCAGAGTACATGGGGAGGGCCAATCAAAAAGAAAACATGGAA30.1266357112705783No Hit
GGGGTAGGAAATCCTCCAGGATCTTAGGAAATTTCACTCCGCTTCTCCTG30.1266357112705783No Hit
GGCATCAGGCACAGCAGCTGCACTTGTCTGACGTCCCTTTGCAGATGCAG30.1266357112705783No Hit
GCCCTAAACCTCAACAGTTAAATCAACAAAACTGCTCGCCAGAACACTAC30.1266357112705783No Hit
AGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACGCACGG30.1266357112705783No Hit
GCGCACATCCGTGCGGAACTGCCGGAAACGCTGGCGGAACGTCTCGGGAC30.1266357112705783No Hit
CATCTGGGAGCGGGGCTGTCCCAGCATCAGGCGCAGCAGCTGCACTTGTC30.1266357112705783No Hit
TCTCTTCCATTTTCTGCCTCTTCCACAACTTCCTTCTTCTCCTTTAAGTC30.1266357112705783No Hit
GCCCTGGGCACACTTGGCACAGCCCACAGGGCAGCAGGAGCAGCAGCTTT30.1266357112705783No Hit
GGCCTGGGCAGGAGGCTGCCCTTCAAGGAAAGAACAACCTTATTTGACCT30.1266357112705783No Hit
CCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTCACCC30.1266357112705783No Hit
GTTCATGTCTTTTATTAACTCATACAGTTACTTGTCTTCTGGTTTGTTGA30.1266357112705783No Hit
TGTCTAAGTACGCACGGCCGGTACAGTGAAACTGCGAATGGCTCATTAAA30.1266357112705783No Hit
GGGTAGAGAGAAGGCAGAAGGTAGATGTAGACACTACAATTCAGACGTTT30.1266357112705783No Hit
GGGTCACAGTTGCTGCCATAAGGTCTCCATCTCCTTTTCTCTTGTTAGCG30.1266357112705783No Hit
CTATAATATCCCGGGGCAAACCGGAGAATTTGGCAGTCCGATTGGGGGGG30.1266357112705783No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30.1266357112705783No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)