FastQCFastQC Report
Tue 10 May 2022
EGAF00003680385

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003680385
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences506031
Sequences flagged as poor quality0
Sequence length140
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTGTAGATGCTCCAGTCTCGGCTCAGCCAAACACTGTCAGGGCCCCCAG9270.1831903579029743No Hit
GGTCTATAGAGCTCACACCCATACTCCCAGCTGGGACCCAGCCTTCCCTG5540.10947945876833631No Hit
GTCCTGCAGCTCCGCTGCTGCTTTCTTAGTGGGCTCGGCCAAGCCTGTGG5420.1071080625495276No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)