FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003680599

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003680599
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20
Sequences flagged as poor quality0
Sequence length100
%GC55

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCATTGCTGCCAAACAGGATGGCAGCGGGGCTGGAGCCCAGCGACGCA210.0No Hit
CCGCAGGCCTCGCGCTTGAGCATCGGATGCTGGATGCACTTGAACTCGCG210.0No Hit
GCGTTTAGCACCGATAGCTGGCGATAAGAAACTGGATATCCGTTTCGAAA15.0No Hit
TCTTATACACATCTCCGAGCCCACGAGACGGCGAGGCTATTATCTCGTAT15.0No Hit
CACCAATACCACGCGCATCCCCGACGCTAATCACAATAAAGGGCTTGCCT15.0No Hit
GTCTTGCGCGCAATGTCGTCACGGAAGGCGCGATCCCGCTCGACGATGGC15.0No Hit
CATCTGCGCCAGTGGCCCGAAGTGCGAGAAGTCCATCAGGTCGCACATGA15.0No Hit
CTGCCCCTATTGCGTGGCAGCGGAACGACTCCTGAAGCAGCGCGGTGTTG15.0No Hit
CTCTTATACACATCTCCGAGCCCACGAGACGGCGAGGCTATTATCTCGTA15.0No Hit
CCATCCAGGTCCACCATCGGAACGACGAGGAAGACCAAATTCTCCCTCGC15.0No Hit
CATTGGGTCACCAGCAAATCGCGCTGTTAGCGGGCCCATTAAGTTCTGTC15.0No Hit
CCCCCAGCTGAGCCTGACTGACTGAGCAATATTGACCATACCAAAAGAGT15.0No Hit
GTCCGCCTGCGGGGCCAACTGATGGAAGACGCGTATCCAAGCGGCTACGG15.0No Hit
ACCTCCCTCAAAACCCTCGTCAGCTGTCAATTCCAGACCTCGTACCCCCC15.0No Hit
CGCAAGAAGCGGTCATACCCCGCATGTGCTGGAAGAAGCGTTGTCCTGGC15.0No Hit
AAATTCGTCTGAAGCGTCTCGGCAAGATCCGCACCCCGCACTACCGTGTC15.0No Hit
ATCCAGACATCGATGTCGGTTCGCTTGAACCGTCAAGTGACACCGACCTT15.0No Hit
GAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAA15.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)