FastQCFastQC Report
Tue 10 May 2022
EGAF00003680703

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003680703
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2085838
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG23330.11184953002102752No Hit
ATGTCTAAGTACGCACGGCCGGTACAGTGAAACTGCGAATGGCTCATTAA23060.11055508625310306No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA21390.10254871183668146No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)