FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003681135

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003681135
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31
Sequences flagged as poor quality0
Sequence length100
%GC65

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCACGCTGCCCATCGACGCCGAAGCCCTGTACGCCGAGCTGCGCCGCGC39.67741935483871No Hit
TCCATGGTGTGCACGAGGCAGCGGTCGCCCGCGTCGGCGATCCGCCGCAG26.451612903225806No Hit
GTCCGGGGTGTGGACGGACATCATGCACGAACGACGCAAACGCGCCACGG26.451612903225806No Hit
CGACGGCGGCTCTCGCCTCACCACCACCACCTACTTCAACTCTCTGGACG26.451612903225806No Hit
CATCAATGCAGTCAAGCGCGCGCTATGAAGGTTTCCCTTCAGTCGGGCAA26.451612903225806No Hit
GCCCCGGGAGGCCTTACCTCCAGCTCTGCTGGTAGCGGATCTGCTCCTCG26.451612903225806No Hit
GAAATGAGCCAAGCACGTCACCCAGATTGCCCCTGTCGTTGTGGCTTGCC26.451612903225806No Hit
GGCGTTGAACGCGCCTTAAGACCCGGTCGGCGTCGTCGGTGGGTTCTCCG13.225806451612903No Hit
CCACCATATCAACGACAAACATGTTTTCAAGAAGCTCCCAAAGGGCCACT13.225806451612903No Hit
ACACTCGCTGCGGCGAGGAGGTCCCTCCCCTTCGCTTCGCTCCGGTCGGG13.225806451612903No Hit
GATATGCACGGCAGGCAGCCACGAGTTGGGAAACTGCCACGCTCTCATCG13.225806451612903No Hit
CACGTCGCCCGCCTGCGTCTCGATGATCGGCAGCGCGGTCAGCGACCCGG13.225806451612903No Hit
CTCAGACCCCGTGCAGCCCCAGCACCCAAAGCCAATGCTCGAAGCAGTCC13.225806451612903No Hit
GCACCAGGCGCTCCACCCGGCTGCGAGCGGCGCCGCGGGCGGCGCGCTCT13.225806451612903No Hit
GGATTAGCCAGGCGCGGTTTGATCCATTTCAACAGGGTGCTGAATAATTC13.225806451612903No Hit
ACACTCGCTGCGGCGAGGAGGTCCCTCCACTTCGCTTCGCTCCGGTCGGG13.225806451612903No Hit
GAGCAGGGCCGACCTCGATGCCGTGGAGAACGCGATCCGGCCCGCTCCGG13.225806451612903No Hit
GTATGGGTGAGCTTTCCGATGAGTTGTTCGGCGAACCCGCCTCCATACGC13.225806451612903No Hit
GTGTATGGATGGAATTCCAAGAGTCCTCCGTCAGGGAATAACTGTCTCTT13.225806451612903No Hit
ACCCTGAATGAAGATCGAACGGCGGCGGCGAATTGGCCCCCGTCGCATCG13.225806451612903No Hit
CCTTCGACCCGTGACCAGGGGTGCAATCGGCCCACTTCGTGTTGACGTTG13.225806451612903No Hit
CCGGCAGGTCGTGCGCGACGAGGGCGGTCAGACAGCAGCCGCGCGCCTGC13.225806451612903No Hit
GTGAGGGCCCTCGGTGAGATGGCTATTCGTCGTCCGTCCTCAGGCGCCTT13.225806451612903No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)