FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003681137

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003681137
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33
Sequences flagged as poor quality0
Sequence length100
%GC61

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATTGGGAAGCGACGACGACGGGGGTGCCGGCGGAGATGACATCGAGGAT515.151515151515152No Hit
CTGTTGAGGGTGGCGGTGGTCTGTGGCAGATCGGCGTCATTCAGGCCCAG39.090909090909092No Hit
GTTTTAACACCAGATCGCAGGCTTTGGTTTTCACCTTTTCTGCCAGCGGA39.090909090909092No Hit
GTCCGCGCCTTTGATTTCTTTCACGATCCCGTTTTGTGAGTTGCTGATTC26.0606060606060606No Hit
ATCCACGCCTCCGAGTGCTCACGAAAAAACTGCTGAAACCCGGCGAGCAG13.0303030303030303No Hit
GTGCAGACGCGCGGCCAGACACGCACCACCGGATACGACCCCGACCAGGT13.0303030303030303No Hit
GCCAGAGACAGCTAGCGGCGTTGCGATGGTGGTACACAATGCGGTGACAA13.0303030303030303No Hit
GCCGAGAGCCTGACGGCGTTGCAGTCGGCCATCGACCAGGGCATCCGCTA13.0303030303030303No Hit
GTCCGGGGTGTGGACGGACATCATGCACGAACGACGCAAACGCGCCACGG13.0303030303030303No Hit
GGTCAAACACGTTCAGCAATTCCTTGGATTCTGCAACTTCTACCGACGAT13.0303030303030303No Hit
GACCGCCCAGACCTTCGTGGACACCTTCAACTGGACTGTGGACGTGGACA13.0303030303030303No Hit
TCGAGGATGGCGGTCGATTGGGCGACCACGCGGTCGCCCACGCGCAGCGC13.0303030303030303No Hit
ATCGCGCGACGGCCACGCACGCTTCTCGACTCTGCACAATCGCACACCTC13.0303030303030303No Hit
CCGTCACCACGGCGGGAAGGCCCGCCACCTCCGTCTCTCCTACCACGCGG13.0303030303030303No Hit
GAGGCGGTGTACCGCCGCTGACGGCCCGCGCCTCACTCTCCCCGGATGGA13.0303030303030303No Hit
TGGCTGGAGCTTGCGAAGCACCCGCCTCACCGAGGAATACGACTGCGACG13.0303030303030303No Hit
GCACAGGCCCTCCGCGACTTTCCTACACTGAGGATCCATCCCGCGGGATC13.0303030303030303No Hit
GAGCACCAGGACGGACTGGTGGTCGGCGCACTGGGAATCGCCGTGTTCAT13.0303030303030303No Hit
ACAATGGTGCGCAACTCGCCGGCCACTGGGGCTTGACGGGCCAGCAGATC13.0303030303030303No Hit
TTCCTCGCTGAGCGCCTGCGGGATCAACGAGGTCCCCGCCTCATAGCGAC13.0303030303030303No Hit
CCGGCAGGTCGTGCGCGACGAGGGCGGTCAGACAGCAGCCGCGCGCCTGC13.0303030303030303No Hit
ATCGCGCGACGGCCACGCACGCTTCTCGACTCTGCACAATCGCACACCGC13.0303030303030303No Hit
CCACCATGGCCTTCGTGCGCATCCTGGCCAAGCTCCTCCGTCACCCCGCC13.0303030303030303No Hit
TGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGT13.0303030303030303No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)