FastQCFastQC Report
Fri 24 Mar 2023
EGAF00003681339

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003681339
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71165132
Sequences flagged as poor quality0
Sequence length35-151
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACACACACACACACACACACACACACACACACACACACACACACACACA923680.12979389963051008No Hit
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG718530.10096658009430798No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)