FastQCFastQC Report
Wed 27 Sep 2023
EGAF00003681451

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003681451
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences48033119
Sequences flagged as poor quality0
Sequence length35-151
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN981780.2043964706934813No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA492670.10256881298922103No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)