FastQCFastQC Report
Mon 5 Sep 2022
EGAF00003681876

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003681876
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13273912
Sequences flagged as poor quality0
Sequence length35-76
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN781380.5886584150927021No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT186590.14056895962546687No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT137680.1037222485729904No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)