FastQCFastQC Report
Sat 1 Apr 2023
EGAF00003681968

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003681968
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25760610
Sequences flagged as poor quality0
Sequence length35-76
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN512830.19907525481733546No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT286970.11139875957906277No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)