FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003682366

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003682366
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53
Sequences flagged as poor quality0
Sequence length35-76
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTGTTGGGTGTGTTTGGTTTTTTTTTTGGGGTTAAAATAAGATTTAGCA11.8867924528301887No Hit
CCAGCTACTTGGGAGGCTGAGGTGGAAGAATCACTTGAACCCTGGAGACA11.8867924528301887No Hit
CAGGTCCTTCTAGTCAGCCATTTTCAAGGCCCCTCCTGATTATTTTTCTTGTGGTTGTCTTAAGGCTCACATAAA11.8867924528301887No Hit
TGGGTGTGTTTGGGGGTGGGGGTGGCAAACTGCCTGCCAGTCATCCTGTA11.8867924528301887No Hit
TGTGTTGGGTGTGTTTGGGGGGTTGTTGTAACTTGGCATTTGTGCCTACA11.8867924528301887No Hit
TGTTTGGTGGGGGTTTTAAACTTTGGATTTGGTACAATTCTTTTAAGTGA11.8867924528301887No Hit
TGGGTGTGTTTGGTTGGTGTGTGGAGAGCCTTTATGTCTAGCTCAGGGAT11.8867924528301887No Hit
GGCAACAAGGGAGGGAGGAACTTGGAGGTGGGGGCGGCGGCGGTGGAGAAGACACAGTTGCCCCAGGCTGTGCGC11.8867924528301887No Hit
TGGGTGTGTTTGGTGTGTTGGGTGTGTTTGGTGTTTTGGGTATCCTTTAGAGATCTTCAATGCTGTCAGTTTTCT11.8867924528301887No Hit
TGGTTGTGTGGTTTTTATTTGAAGATATTTTCTTTTCCAGGATTGGCCACAAAGGGCTCCAAATATCCGCGTGC11.8867924528301887No Hit
TGTGTTGGGTGTGTTTGGTTGTGGGTTGTGAAGGATCATATATTTAAAATGGGACGAGAAGGTAGCAGTGGGACT11.8867924528301887No Hit
GTTGTGGTCTTGGCTGACTGCAACCTTCCGCCTCCCAGGTTCAAGCGATT11.8867924528301887No Hit
CGGTGGGTGCACTCAATTGGTCTAGGATTATGAAACCTAAACCTCCCATT11.8867924528301887No Hit
CAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAATTTCCCCAATC11.8867924528301887No Hit
CCCTCAGCTTTGCCTGTGCGCAGCCTCCGGTGATCAGGTGAAGCAGGTCAAGCTTCAGGCCATGCACGGTGGCTC11.8867924528301887No Hit
CACTGTTTACTTTTTGGATATCAACTGGGGTTTCCAAATGGCTCCTGAAT11.8867924528301887No Hit
TTGGAAAGTAAGATTTCCATCCTGGCTAACACAGTGAAACCCCGTCTCTA11.8867924528301887No Hit
GATCTTCTGCTTCTCCCCCTCCACGTGTGCCCTTGAGGTTGTGGTAGGCAAATAAGACTCAATACCTACGGAGAA11.8867924528301887No Hit
TGCAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTTTCCACACAAACACCCAAACACACCCAACACA11.8867924528301887No Hit
TGTGTTGGGTGTGTTTGGTGTGGTTGTGATGGTTGTGTATGTTGGGGTTT11.8867924528301887No Hit
CCAAGAATGAGAGGGTCATTTAGAAAGAGCTACCTTGGGAGAAGAAATGA11.8867924528301887No Hit
TGTACATATAAAATAACTAAGAGAGTATAACTGGATTGTTTGTAACACAAAGAATAAATGCTTGAGGGGACGGAT11.8867924528301887No Hit
TTGGGGTTTTGGGTGGGAGGAGGGTGAGGATCAAAAAACTGACACAGTGC11.8867924528301887No Hit
TGGAGTTTCAGTAAGAAAAGAAAACAGATCCACGATGGAATAAAAATAAA11.8867924528301887No Hit
TGGGTGTGTTTGGTTGGGTGGTGGCAGGGCTTCACTGGGAAACTAAATGA11.8867924528301887No Hit
GAGAGAGATGAAGTGAGGAAGGAGGAGGGGGAGAAAAAGAATGAGAGTCAGGGAACAGACAGTCATAGGCAAGG11.8867924528301887No Hit
TTGGGTTTGGGGGTTGTCTCCGATGCTTTCCTTTAATCTTACTTTATTTG11.8867924528301887No Hit
TCCATCGGGCAGTGGGGGCAACAGACACACAGACAGATTATTTAGATTCCACGCCCTTTGTTAGTCCACTGAAAA11.8867924528301887No Hit
TTGGGTGTGTTTGGGGGTGTGGGTATCCAAGAGTTAAAGCAACAGAATTTTCTGCCCCACAACGGATGAACCA11.8867924528301887No Hit
TTGGTGTTTTGGTGAACCTGTCACCCAAGCGGTGTACACTGTACCCAATG11.8867924528301887No Hit
CACAAATTTGTAGAGTACTGCCAGTATGAGAACTGTTAATCTGTGACACT11.8867924528301887No Hit
TGTGTTGGGTGTGTTTGGGTTGTGTGTGGCCGGCACATTTATTCCCAGCC11.8867924528301887No Hit
ATAAAAGAATTAGAGAGCAAAATTAGTGGCAAAAAAGAACAACATTAGTA11.8867924528301887No Hit
TGTGTTGGGTGTGTTTGGGGTGGTTGTGGGTGCAATGTATCCGTGTGTAA11.8867924528301887No Hit
GGGTGTGTTTGGTGGTGTGTTGGGAGTGCCCAGTCCGTGCTGAAAGCGAT11.8867924528301887No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN11.8867924528301887No Hit
TGTGTTGGGTGTGTTTGGTTGTGGTTGTTCAGACTGCAGATCATTTCAACACAAAGGAAATCAGTGCAGAGTCCC11.8867924528301887No Hit
ACAAACCCTTCAGTGCCTCAGCATATGTTGAACTTTTCTCAGATCTTTCCATCTGTTTTTTCCTAATAATGAATC11.8867924528301887No Hit
TGTGTTGGGTGTGTTTGGTGTGGTGTGTTGGGTGTGTTTGGTGTTGGGGG11.8867924528301887No Hit
GTTGGTTGTGGAAAATGCTTGGAGTGATGCCACATTTCCCTCCAAACAAACCCAAACACACCCAACACAACACAC11.8867924528301887No Hit
TGTGTTGGGTGTGTTTGGGGGGGTTTTTGTTTTTTGAGACAGGGTCTTGC11.8867924528301887No Hit
CTTAGCCCATGGAGCAGAGCCCTTCCTGCCCTTTGCAATCCTTGGTGAGGGCTGGAGTGCACAACCAAACCAAAC11.8867924528301887No Hit
TGAATTTCTTTACTGGACTATGTGAAAATTTTTATCTCTATTTTAAACAT11.8867924528301887No Hit
TGTTTGGGTGGGGGGGTTGTAGCTCTCATATTAAAAATTATAAGCTTAGA11.8867924528301887No Hit
TGTGTTGGGTGTGTTTGGTTGGGTTGTTCTGTGAAGCAACACCAAAAAGATTCTTATCCCCAACCATCAGATAGC11.8867924528301887No Hit
TGTTGGGTGTGTTTGGGTTGTTTGGTGGTGTGTTGGGTGTGTGTTGTGTG11.8867924528301887No Hit
GCCTCCTAAGCAGTCCCACCAGGAACAGATCTGTCCTATGAGCAGACTTG11.8867924528301887No Hit
CTGCTATGAACAAATATCTGCTCAAGTCATTGCATTCATTACTATTTGATATGTACCCACAAGTGAAATTGCC11.8867924528301887No Hit
TTTGGTGTTTTGTTTATTTTTTAATGTAAGCTCTGGGATACATGTGCAGAACGGGTGCCGGGGTTTGTTTGATA11.8867924528301887No Hit
TGGTTGGTTGGTGTTTTCTTACAAAACTAAATGTTCTTCCATAGGATCAA11.8867924528301887No Hit
TGTGTTGGGTGTGTTTGGTGTGTGGGGGGAACCAGAAAATAACAAGAGTT11.8867924528301887No Hit
TGTTGGGTGTGTTTGGGTGGTTGGGTTTTTTTTTGGTGTTTTGGAGGTCGCGAGGTTTGGGTTATTCCTGGCCG11.8867924528301887No Hit
AATATTGAAAAAAAAAACGCAAATCATTTACACAATGTATGTCTCATTGTGTGTGATGCCTGCCTTACACATCCC11.8867924528301887No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)