FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003682367

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003682367
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53
Sequences flagged as poor quality0
Sequence length69-76
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTAGAGACTATTTGAGTTTTAGTAGCTGTACTCTGGGCCCCGCCCGCATGTGGTTTGGCAGATGGATTTTTGC11.8867924528301887No Hit
TTTGTTGGGTTTGTTTGGGGTGGTGTGGCAATCATTTGTAACACATGTGA11.8867924528301887No Hit
TGCAAAAATTAGTTTCCTATAGGTAAATTGAGTGTAGGCACAAATGCCAA11.8867924528301887No Hit
TGTGTTGGGTGTGTTTGGGTGCTTGTGGGCTACTGTGGAAAAGCAACTAT11.8867924528301887No Hit
AAACATCCGTGAGAATCCGGTCATTGGACAGAAAATTAAGTGTAACAGCG11.8867924528301887No Hit
TTTGTTGGGTGTGTAAGCGAGTGATTGGGGAAAGGGAAAAAAGACAACAC11.8867924528301887No Hit
TCCTGACTTCAGGTGATCCACCTGCCTTGGCCTCCCAAAGTGCTGGGATT11.8867924528301887No Hit
TGTGTTGGGTGTGTTTGGTGGTTGGTTTTTGCCTGATCAAAGGTCAACCA11.8867924528301887No Hit
TGTTGTGTGTGTTGTTGTTTTGGAAATAATTAAAAAGTTTATTATTAAATCAAATAATACAATTTTATACCTAAA11.8867924528301887No Hit
AGAGTAGGGTGTCTTTACATTATTGTCTGTGTTGCAAATTCTGGAAGTAT11.8867924528301887No Hit
TGTGTTGGGTGTGTTTGGTGTTGGGGTGCATTCACAAACCCTGAGCTAGA11.8867924528301887No Hit
AGTCTTGGGACATTTAGGTTACTAACATGAGACAGAGTCTAGCTCTGTCA11.8867924528301887No Hit
TGGGTGGGGAGTCTTACATTTGTATTCTGTGGTTGGTTTGTATGGTTTGA11.8867924528301887No Hit
TGTGTTGGGTGTGTGTGGGTAGAGGGTGGAAGTTTTTATTATGATTACTT11.8867924528301887No Hit
TGTTTCATCTTTAACTTCAGGTTGCATCCTTTTCATTTTCAAGGTACTTA11.8867924528301887No Hit
TGTGTTGGGTGTGTTTGGGGTTGTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAATGTTGGCCTGCCTTGCT11.8867924528301887No Hit
TTGGGAGAGGCGCTGGGAGGCGGAAGGGCAGGGCCGTGGGCCGCCTGCCCCTACCCACACCCCGCCAAAGTGGGT11.8867924528301887No Hit
TGTGTTGGGTGTGTTTGGGTGTTTGTGTGGAAAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGCA11.8867924528301887No Hit
TTTGGGTGTGTTTGGTTTTTGTGGCGCCCTGCCTGCTTAGCTGAAACATT11.8867924528301887No Hit
TTTGGTGTGTTTGGGGTGGTGTTGTGTGTATTTTAGTTAAAAAATTTTCC11.8867924528301887No Hit
TGTGTTGGGTGTGTTTGGTGGGGGGTTTGTGGTCCCAGCTACTCAGGAAG11.8867924528301887No Hit
TGTGTTGGGTGTGTTTGGTGGGTGTTTGGGGGAAACTGCTAAGCTCGCAA11.8867924528301887No Hit
TGTGTTGGGTGTGTTTGGTAGGCGTGGGAACAAGGTTTTTCAGTGGACTAACAAAGGGCGTGGAATCTAAATAAT11.8867924528301887No Hit
TGTTTGTTTGTTTGTTTTTTAGACCAAGACTCGCAAAGGCTGGAGTGCAG11.8867924528301887No Hit
TGTGTTGGGTGTGTTTGGGGGTGTGGTTGTGCATCTCTGTCTTTGACTTT11.8867924528301887No Hit
TGTGTTGGGTGTGTTTGGTGTTGGGGTTTAGGCCAAGAAACAAATCAAAT11.8867924528301887No Hit
TGTGTTGGGTGTGTTTGGTGTTGTGTATCTTTAAATAGTCAGCACGGAAG11.8867924528301887No Hit
TCAGTACTGAAAGAATGCGAGGTACTGGCTGACTAGATTATTAATAGAGT11.8867924528301887No Hit
TAACCTCCAAGTGTTGGCTCTATGACTGATGAACATGGGCATCAGAGGCCAGTAGCTTTCTTTGCCTATAGAGTA11.8867924528301887No Hit
TTTTTGGGTTTTTTTGTGTGTTATTGAGAATTTTAGAAAAATAATAAAATACAAATAATAAATAAAACTTAATC11.8867924528301887No Hit
TTTGAGAAGTGTAATGTGCGAGTTCGGACAGAAAGGTTGAAAAATGACTTAAAATATTAATATTTATAAAGCATT11.8867924528301887No Hit
TGTGTTGGGTGTGTTTGGTTTGGTTGTGCACTCCAGCCCTCACCAAGGAT11.8867924528301887No Hit
TGTGTTGGGTGTGTTTGGTGTGGGTTGGGGGAGTTGGGATTCAGGGAGAA11.8867924528301887No Hit
TGTGTTGGGTGTGTTTGGGGTGTTGTGTCAGGACAACATATGAAATAAAT11.8867924528301887No Hit
TGTGTTGGGTTTGTTTTGTTGGTTAAATGATGAACAGGAATAAATAAAAA11.8867924528301887No Hit
AGTGTAGGGAGAGATTCGGATTTTGGTGGAAAACTCCTTTGAGTAAACAC11.8867924528301887No Hit
AGTGTTGGATGACTATCGTACTCGCAGGATATTCCCACAGCAGTGGAAACACTGCACAAAACTAACTCACCACAA11.8867924528301887No Hit
TGTGTTGGGTGTGTTTGATGGGTTGTTGGTGGTACACGCCTGTAGTCCCAGCTTCTCAGGAAGCTGAGGCAGG11.8867924528301887No Hit
CCCGGGGGCTGGGGTGCGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGG11.8867924528301887No Hit
TGTGTTTGGGGGGTGTGTGTACACCATGATTTTGGCCATGACCTTCAGTCAGCAACATTAGTTTCTCTCAGAGG11.8867924528301887No Hit
TGCAGGTTGAGGCTGCATTGAACTGATATTGTGCCCCTGCACCTTAGGCTGGGAGACAGAGCAAGACCCTGTCTC11.8867924528301887No Hit
TGTGTTGGGTGTGTTTGGTGTGTTGGGTGTGTTTGGGTTGTTTTGGTACA11.8867924528301887No Hit
TGTTCTGTGTGCATATCGTATTTATGAGACAATTTAGTATTTTAAGTGCA11.8867924528301887No Hit
CTAGATAGTGGAGATAGAATGGCGACAGAGGATTGAACTTTCACACATGC11.8867924528301887No Hit
CTCAGTCAGGCAACACACACAAACACACACACATAGTGTCACACACAACCCCAAACACACCCAACACAAGATCTG11.8867924528301887No Hit
TGTGTTGGGTGTGTTTGGGGGTGTTTTGTTACTTTTTGTAGCTATTGCAA11.8867924528301887No Hit
AGTCAAAGCTCACATTGGTCTGGACTCAGACAAAAGCGAGAGATTGTTCT11.8867924528301887No Hit
CCAATGTGGGCAGATGACGGGAGGTCAGCAGTTTGAGAACACCGCCGCACACTTGATGCCTACGATGCTCTCCAA11.8867924528301887No Hit
TGTGTTGGGTGTGTTTGGGGTTTGTTTGTGAGCTTAAATTGTCATCAGATTAAAATAAAAGATTGTAACCACAAA11.8867924528301887No Hit
TGTTGTCGATGACTGGTCCCCGCGTGGATCCGAGGGGCAGTTTCAGACTT11.8867924528301887No Hit
TGTGTTGGGTGTGTTTGGTGGGTTGGGGGAACGCTGGCAGGGGGTTGAGGGAAAAAAAGCCTACACATTGGGTAA11.8867924528301887No Hit
TGTTTGTGTTTTTTGTTGTTTGGTGTGTGACAGTATTCAACCCTAAATGAGATTATTAGTCAACAATATTGAACT11.8867924528301887No Hit
CAAATGGAAACTATCCAAAAACACATTGGAAACAGTCTGGCAATTACTCAAAAGGCTAAAAATAGGGTTACCATA11.8867924528301887No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)