FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003682867

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003682867
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28021
Sequences flagged as poor quality0
Sequence length35-76
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1090.3889939688091074No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN790.2819314085864173No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT580.20698761643053423No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT320.11420006423753612No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)