FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003682888

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003682888
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67
Sequences flagged as poor quality0
Sequence length39-76
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGATAGAACCCTATATCAAACCACATACAAAGAGAAAAGATTAATTCTAA11.4925373134328357No Hit
CTCTCAACCGATACCACAACAGCCACCCGCTTCGGGAGCGGGCTCGGAAG11.4925373134328357No Hit
GCAATAACACAGGGGCATACAGTAACCAGGCAAGAGTTCAATCGCTTAGTTTCGTGGCGGGATTTGAGGAAAA11.4925373134328357No Hit
GCAAACATATATGCTTGAGTCCATTATTTAAGGACTATAAAATGACTTCC11.4925373134328357No Hit
ATATAGATTGGCGCTAGTAGATCACAGAACAACCGCCGCATACGGCCGAT11.4925373134328357No Hit
CTATGGTTTTCAAAACAATCACCATCATGCTATTAATGATATTAAAATCC11.4925373134328357No Hit
CCTCCTGCGGCGCCGTGGAGTCCCGGTCGAGAGGCGGCGCCCGCGCCGAG11.4925373134328357No Hit
CTGTATCTGTAAAGGACTTGTATTAAGACTATGTAAAGAAATTCTACAAC11.4925373134328357No Hit
GTATCAACGCAGAGTACGGGGAAGTGGAGCACCGATGATGTGCAGATCAA11.4925373134328357No Hit
GTGGTAAACACACAATTAAAACTTGTCCTCATTAAAATGGACTTTTGTAC11.4925373134328357No Hit
GAAAGGTACAGAGTGAAGGTAATGACCCTTATGAAGAAAACTTGATATTA11.4925373134328357No Hit
TCCCTGTGCTTGTGGACTGGTTTGGTGATCCACTGGGTGTCAGGATTTCT11.4925373134328357No Hit
GGGCTGACGCCGCTACATATATAGGAAAAGGGAAGGTAGAAGTGCTGAAGGCACTCGTGGAAGAGCTTGAAGCTG11.4925373134328357No Hit
GCTGAGGACCACCTGAAACGGGCATCGTCGCTCTTCGTTGTTCGTCGACT11.4925373134328357No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA11.4925373134328357No Hit
ATTGTCTAGTTTTTACTAGCTATCCTTAATTCTTTTTTTTTTAAGTGAAA11.4925373134328357No Hit
GGCACGGGTACCGCCATCCCTAGTGAATTACGACGGCGCTCCGCGGCTTG11.4925373134328357No Hit
GATATAGGTCGTGGCTCCCTGTATATCGAGGTGAGTCTATCTGGATCAAC11.4925373134328357No Hit
GAGTAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTAT11.4925373134328357No Hit
AACCAAGATGCGGCCCGTCGTAGGAGTGGTGGCTAAGGCACCGCAGGGAATTTTAGCCGGATCTAGACGATCTA11.4925373134328357No Hit
GTCCTATTCATTTGTCCAGAAATTTAGCTGGTGGGAAACAGAAGTATTAA11.4925373134328357No Hit
GTACATTGTAGAGCCGAACTTTGAGTTACTGTGCAAGAT11.4925373134328357No Hit
ATATATATGTATATATATTTATATAGCCTGCTGAAAGTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGCAG11.4925373134328357No Hit
TATCAACGCAGAGTACGGGGATTTTGGAGTTGCACATAAGGGATTATGGA11.4925373134328357No Hit
GTATCAACGCAGAGTACGGGGGGAATTCTGGACATTAATTAGGGCTGAAA11.4925373134328357No Hit
GGGCAAAGGGGCAACTCGAGCTACTCTCCCCAGCGGCTAGCATGTGTAGT11.4925373134328357No Hit
TCCTCGGGGAGCTTGACTGATAATTCTGTATAAGGTGATCGCAGGTTGTGCAATCATTGCTCAAAAGGGTGTACA11.4925373134328357No Hit
GTATGAGATCGCCGCATCCTATATGATACGCGCACTGTCTATACATGGAC11.4925373134328357No Hit
CCCTGGAGTGACACTGGCCTGGCTTTGTGTTTCCGCTCTCTGGCCGCTTGAGGGGGAAGTGACCAAGGCTGACTC11.4925373134328357No Hit
GTCTTGGCAAGTTGTCCAAAGAAACCTGTAAGTTCTTACCTTCGATTTTC11.4925373134328357No Hit
GTTAAGAAATTTTGCTGGTTTTTTGCGACGTTGGTGTTGTATTCTATAGC11.4925373134328357No Hit
GTCTTAGCAGTAGTTTATAAGGAATATATCCCATTTTTAGTTATAATGAC11.4925373134328357No Hit
GTCTACTCAAATTTCCTTCATGCAGATATCCAATTGACTCTGCACCCTTT11.4925373134328357No Hit
CTGCAACCTCCGCCTCCCAGGTTCAAGCAATTATCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGTGCG11.4925373134328357No Hit
ACTAATCTTATGTTATTAACCATTTCCTTAAATTCTTCTGGGTCTGCTGA11.4925373134328357No Hit
ATGCTACTCTTCTAAGTCTTCATATTTTCTCTTAAAATCTTAAGCTATTA11.4925373134328357No Hit
GTCTACGAGTGGCACGAATCGCACGGATGTTTGGTTAAAGAACAGTCGCAGTTTTCCTCAAATCCCGCCACGAAA11.4925373134328357No Hit
CCCAGCAGACTTAATTCAGGTTTTGCTTCTGCTACATCCCGCCAGTAAGGAAGCAGCAAAGGTAGAGAAGAGAC11.4925373134328357No Hit
GAATATATCCCATTTTTAGTTATAATGATGCCTTATGTGATAGATGCCTC11.4925373134328357No Hit
CATTCTTGTTATATCTTCACATGGTGGAAGGGGCCAGCCAGCTCTCTGGGATCTCTTTTATAAGGACACTAATCC11.4925373134328357No Hit
GTCCTCAGCGTACGGCGGGCCCTCTGAGAATTGGGATACAGGCCCCAAAAGGCTGAAAGGGGGCAGTGAAGTCGG11.4925373134328357No Hit
CAATGGCACTCTCTCACAGCCAATAACTTCAACAACTTCCCTATCTTTAATCCTCTCACTCCACAAATTCATAAG11.4925373134328357No Hit
GAATATATCTTTAGAAATGAGTTGCACAATTGAGAAGGCACTTGCCGACG11.4925373134328357No Hit
ATCACATAAGGCATCATTATAACTAAAAATGGGATATATTCCTTATAAGCTACTGCTAAGACAGCTAAGAAAGCT11.4925373134328357No Hit
ATTAACAACCGTTGCGACGGGTCCGAGACATTATACACTTATGTATTTGG11.4925373134328357No Hit
GTACGGGGGGAATTCTCTTGCCTCAACAATAACGTCTCTTTCAGAAGGCATTGGTATCTTTTCCCCACTTCCAAG11.4925373134328357No Hit
TGCTCGTACATGCCGTGGCCTATCCGTACATATCGAGGAGCGATAGTCCATTCGGCTGCCACTTAGTTCAATAGG11.4925373134328357No Hit
TGCATCCACAATGCAACCACGAACTGATTTTCTCTTTCTTTCTCCAGTTCTCCTTGGTCTGTAACAGGAATGCCC11.4925373134328357No Hit
ATTCTTTGGTATAGTTGGGATTTTAATATCATTAATAGCATGATGGTGATTGTTTTGAAAACCATAGGAGGAAAC11.4925373134328357No Hit
GGCTTATATTGAAGTATAAACCAATGAGAGAGCCTCACTTAGTTACAGTT11.4925373134328357No Hit
GAAGAAAGACACCCAAGTCGTAGGTTGATGCTCAGACACTGATGCAATAA11.4925373134328357No Hit
CCATAAAACTGTAACTAAGTGAGGCTCTCTCATTGGTTTATACTTCAATA11.4925373134328357No Hit
CGTTAACAGTTCTTGGCGCAAATAGCGCTGAATCGCTTCTTTAAAGGCTGCAGCGTCGTCCTCAAATTTCGCA11.4925373134328357No Hit
CAATATATAGTGGGTACATCAAGTCCATCTGACAAAATGGGGCAGAAGAG11.4925373134328357No Hit
ACGCAGAGTACGGGGGAATTCCTGGAGATTGTCTCGTACGGGTAAGAGCC11.4925373134328357No Hit
ATCCTACTGTATCTGAAAGAAGAACACTGTAGCCGCTTGGCAGGACCATTTTTCTGGTCATCGGGTCCAGCGTGG11.4925373134328357No Hit
GACAGCTAAGAAAGCTCCAATTGGTGAAGTTCCAACATCTCCTGGAAAAACCTTTGCTGGATATTTGTTAAATAT11.4925373134328357No Hit
ATACAAACGCAGGGAAATCAACATGGTTCAACCGCCTGACGAGTGCTGACAGCTATGAAGAAGACCTCCTGTTTG11.4925373134328357No Hit
TGGTAGATCAAGTTGGGAAAAACTAAAATCTTGACAGTGTTGAGCCTTCC11.4925373134328357No Hit
TATTCAGTCCTTTAAGAAATCGAACAGCATACCCAACATAGTAAAAACCA11.4925373134328357No Hit
ACACACACACTCGCCTCGACAGCGCAAATTAAACATTAAAATAGCAGATA11.4925373134328357No Hit
TTTTCAACCAATCTGTTTTCCTCCACTCACTAACACTTAACCTGTGCCACCACTGGGTAGATATGTTCACTGC11.4925373134328357No Hit
CTACTGATGAGCCCATCGAAGGCATTCTTCACTTCTGTTATGGTGCTTTC11.4925373134328357No Hit
ACATTTATGTTCTTTGTTTCTACATTTTAAGTCTCCAAATGATTTTTCCC11.4925373134328357No Hit
AGATCACTGTGTCTTATTGATGAATAGATTATTTTACCATTATAAAATGTCCCTCCTCCTCTCTAATAATGTTCT11.4925373134328357No Hit
ATGAAGAATATTTTTAAATAACTTAATTGAAAAGTATTGAACTCCCCACCAATTTCAGCTGCAACAGTATTCCTC11.4925373134328357No Hit
AGAAAGAAGTTGAGAAATTTAAGCGCCTGATTCGAGATCCTGAAACAATTAAACATCTAGATCGGCATTCAGATT11.4925373134328357No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)