FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003682889

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003682889
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67
Sequences flagged as poor quality0
Sequence length39-76
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCATACTGATTACACCAAAAATGATTTACAAAATATAGCCAAAAATGGAACGTTATACATTTTGATATACAACT11.4925373134328357No Hit
GCTTCAAGATGAAGCTGAACATCTCCTTCCCAGCCACTGGCTGCCAGAAA11.4925373134328357No Hit
TGCTTGGATGGTGCAGCTTACTTCGCGTACCTGCTGTTTGCATCAGTCCTCTTCATCTATAATCGCGTATCTCT11.4925373134328357No Hit
TATCAGAAATCCAATAAGAATCAGCAATTCAGGAAGAAATATGACAAGGA11.4925373134328357No Hit
ATGGAATACAGAATGTACTCTTTTGTGTAAGGTTTCTTTCCCCTACCATG11.4925373134328357No Hit
CCTTAAACTAATGCTAAAACAACTAAAAAAACTCCAAATCCTACAATTCC11.4925373134328357No Hit
CCCCAGTAGTTTCTGTTGCCTTAGGAGCGGATGTTATTGAGAAGCACTTTACCTTAGATAAAAATATGGAAGGTC11.4925373134328357No Hit
AGTGAGGCTCTCTCATTGGTTTATACTTCAATATAAGCCTTGGTAGGGAT11.4925373134328357No Hit
GTTAACTAAGGGCTGTTTTCAATCAAATAATTGTTACGAGAAGCAGACTG11.4925373134328357No Hit
GGACATTAATTAGGGCTGAAAGCCCTAACATAATGGACGGGAGGTATCCC11.4925373134328357No Hit
ATACGGGCGTCGGCATCCAGACCTGCGGCTGATCTTCGATTTACTAGGCT11.4925373134328357No Hit
AACGTGGACCGTGGCCGATGTCTCGCGACTTCATTAAGTTCTTGAATTTC11.4925373134328357No Hit
TTACTAGACACTGCATTTTCCCATTTAATAGAAAGTACAGATGTCAAATAGCCCCTGAGTTTTATACTACGTGAT11.4925373134328357No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA11.4925373134328357No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGAGATGTTGGAACTCTACCAATTGGAG11.4925373134328357No Hit
GTATAAAATCAGGCAGATTTGATAACGTTTATTGTAAGCCGTCAGCATCG11.4925373134328357No Hit
CTCTTTAATAGCCTTCAGTGACTGTGAGATGCCGTCTACGAGTGGCACGAATCGCACGGATGTTTGGTTAAAGAA11.4925373134328357No Hit
GTTAGATATTGAGGCTGCATCGTGTCGGCACGAAGTGTCTTCCGATGCAG11.4925373134328357No Hit
GAATGTTTGTGCCCCACTACAACTCACATGTTGAAACCTAATTACCAATG11.4925373134328357No Hit
CTATAATGATCCAGCCTTTTATGAAGAATGCAAAATGGAATACCTGAAGG11.4925373134328357No Hit
GAACCATGTTGATTTCCCTGCGTTTGTATAGCCGACAAGCGCAATTTGAA11.4925373134328357No Hit
GAACGGAAGTGAGGTATGTGTTTCACATTTTTCATAATGGAAATTCTTGTGTAGCTAGCAAAAGTTGTTCCTTT11.4925373134328357No Hit
GCTCGAAGGCATGCTTGACGATGCGCACAGTCATGAGCTTCTTGCCGTTG11.4925373134328357No Hit
CTTAATGGACGGGAGGTATCCCAATAGGAGGTTTCCTCCTATGGTTTTCA11.4925373134328357No Hit
GTTTCGTACTTATCGGAGGCCAGGTATCGTCGCGGCGAGTCTCCCCGACG11.4925373134328357No Hit
ATAATATACAAATTGGGGAATTTTGGATGACTGCATAATCCTGTCATTAGAGATTTCATAAGACAGAAGATAA11.4925373134328357No Hit
CTTTTTGTGTTTTTATTTTTTTAACTTACTCAGATCTGTCAATGTCTTCC11.4925373134328357No Hit
ACCACAAAAAATGCTATAAATAGACAGGCTTATAAACTTCGCTCTTACCT11.4925373134328357No Hit
ACATTGCACCATGGAGTGGCAGGTTTTATTCATTGTGGGATACTGGGTATGCAAAAATACACATTCCAATTATTG11.4925373134328357No Hit
TTGGTGAAGTAAAATGGTGAAGCTTATGAATTTGTGGAGTGAGAGGATTA11.4925373134328357No Hit
CCTGTAATCCCAGCTACTCAGGAGGCTGAGGTGGGCGGATTGCTTGAGCT11.4925373134328357No Hit
GCAAATTCTGTATACGTGAAGGCTGTCATAATTGTACTATCTGAAAAAGT11.4925373134328357No Hit
GCGCTCCTCCTTGCGCTGGGCGCCACTCACGATCACGTAGTCGCAGTTGG11.4925373134328357No Hit
GAGAAATACCACGTAGGGAGTAGGATAGGAAGCTCAGCCTGGAAACTGAG11.4925373134328357No Hit
ATAAGCATCTTGATATATTTTTTTCTTTGAATCAGGAAGTTCCCTCCAACGCTGGGCAATTCTTCTAATTAGTT11.4925373134328357No Hit
TCCCAATTATCCATAAAACTGTAACTAAGTGAGGCTCTCTCATTGGTTTA11.4925373134328357No Hit
ATCTTGCACAGTAACTCAAAGTTCGGCTCTACAATGTAC11.4925373134328357No Hit
CAGCATGAATTATTCTAGCCACTAAAACTCTATGAACATCTTGTGAAGGT11.4925373134328357No Hit
ATTCTGACCATACATTGGGAATACTCGCCCCAGTAGTTTCTGTTGCCTTA11.4925373134328357No Hit
GCAGAGTACGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAG11.4925373134328357No Hit
TTGCAATTTTCTTGAATATGGAAGATTAGCTGATCATGCATTAAGCTCAG11.4925373134328357No Hit
TATCAACGCAGAGTACGGGAGAGAAAAAGGTCTCTTCTCTACCTTTGCTG11.4925373134328357No Hit
TGACTGGACACTGCATCGGAAGACACTTCGTGCCGACACGAAGCAGCCTCAATATCTAACACGAGGATGTTC11.4925373134328357No Hit
CTCAAAAAATGTTACTTATTGAGTAAAAAGTGTCTTTTTTTTTAATGTTG11.4925373134328357No Hit
GCGTGAGCCACTGCACCCGGCGGAGTAGCCATTCTTTTATTCCTTTACTT11.4925373134328357No Hit
ACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGGAGGTATCCCAA11.4925373134328357No Hit
GGATAGTACAGTACTCAAAAACAAAAATTGAGGTATTTGGTTCTTCTAGG11.4925373134328357No Hit
AGGTGAGGTACTATGTGAGGTATTTTTTTCAATGTTAGATCATCTATGTA11.4925373134328357No Hit
GATAGATGCCTCTTTAAAATATCTAAGTGCTGGGGTTATGAGTAGGGATG11.4925373134328357No Hit
ATACAACACCAACGTCGCAAAAAACCAGCAAAAATTCTTAACATTATTTT11.4925373134328357No Hit
ACGCTTACACACCGGACGCTTGGATCAGTGGGAAGTGCTCACGCGCGGAG11.4925373134328357No Hit
GGCTTATATTGAAGTATAAACCAATGAGAGAGCCTCACTTAGTTACAGTT11.4925373134328357No Hit
GTCTTAGAAAAGAAAAAAGAAAAAAAAGGCATACAGATCAGGAAGGAAGA11.4925373134328357No Hit
ATTCGTGTTCGCCGTGGTGGCCGAAAACGCCCAGTTCCTAAGGGTGCAAC11.4925373134328357No Hit
GTGCTAGCCAGTCGAGACTGAAAAGCTATAACCCGCAGACCCGAGCGAAAGAGGCGGTCCTTACAAGTCCGCTC11.4925373134328357No Hit
GCTTTCCCCTGTCATTCGCCATAGACGCCGATACCGGGAAAGCAGAAAGA11.4925373134328357No Hit
GTGTTATTGCAGCGTCACGATTACGGGGTACCCTTGTCACCGTCAGCTTA11.4925373134328357No Hit
GCCTATATGATACGCAGTCGCATCCTATCTTACGTGTCAGTACTATGTGT11.4925373134328357No Hit
ATTTAGGGTTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGAGATGTTGGAACTTCACCAATTGGAG11.4925373134328357No Hit
ATATATCATTGTCTGGCTTTCAACGACAAAAAATTACTAGGCGTTCTAAA11.4925373134328357No Hit
GGCAAACTTCAAATTGAGCTGGCTCAGCTGCAATATGCACTGCCGCGTCTGACGGGACAAGGGATCAACCTTTCC11.4925373134328357No Hit
GTATACCAAGACGTCTAAGGGCGGTGTACACCCTTTTGAGCAATGATTGC11.4925373134328357No Hit
GTCATCTATTTGACTTATACAGGTTACATTGCACCATGGAGTGGCAGGTT11.4925373134328357No Hit
GCATCCTATATGATACGCGCACTGTCTATACATGGACGACACTTTGCACA11.4925373134328357No Hit
GTCCTAAAGTCCAGAGACAGAGCACTAATTAGAAAACATTCAGGAGGAAT11.4925373134328357No Hit
CCCGGCTGGTATAACAAGAGGATTGCCTGATCCAGCCAAGATGCAGAGCACTTCTAATCATCTGTGGCTTTTAT11.4925373134328357No Hit
TCTCTGAACTGTTCTATGTTCACACCTTGTGTCTTAAAATCATCCACAGCTTGGCCAGAAGCCTTCTGTTTATGA11.4925373134328357No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)