FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003683209

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003683209
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences149
Sequences flagged as poor quality0
Sequence length35-76
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGAGAATACGCCATCAACATTCACAAGCGCATCCATGGAGTGGGCTTCA10.6711409395973155No Hit
CACTCGCTCCTGTGCTTTCTAAAATAGCTACGTGGCCAGGAACGGAAGCA10.6711409395973155No Hit
GACTAGGGACAGCTCAAAAAATACGAAAGCTTTGAGGGATGTAGCCCTGT10.6711409395973155No Hit
TCCAAATATCTCATCAACAACCGACTAATCACCACCCAACAATGACTAAT10.6711409395973155No Hit
CAAGCAGAACCTAGCAACTTTAGAGACGGCGATGGAGATCGACCCCATGC10.6711409395973155No Hit
CAAGAGAAAGCAGGAAAGATCTAAAATCGACACCCTAACATCACAATTGA10.6711409395973155No Hit
ATCTTGCACATGGCAGAACAACTCAAACAGCAAATTAGAAGACCCCATCCTAGTCCTAAATAATTGTCTGATCTA10.6711409395973155No Hit
ATGATGGACAGGCTTGCCGTAAGTTGCACCCTTAGGAACTCGGCGTTTTC10.6711409395973155No Hit
ATATTATAAAGAGTTATTAATGATTCCGATGAAATAAACAAAATTCAGAT10.6711409395973155No Hit
TCTTTGGTATTGGCCAACAAGAAGCAGATGCTAAAATTCAAGCAAGAACAGTTTATGATCAAGATTGTTGCAACC10.6711409395973155No Hit
AGATGCTGTCAGTTGTGGAAACTATCAATGCAGCAATTGGAGTCACTACG10.6711409395973155No Hit
GGGAGAGCCTGTGCTTCCTCTAGTAAAGGGGCGGAGTAACGGGCCTTTGA10.6711409395973155No Hit
GCCTAATCCCATTAAGCACTATTCCATTAATAAGGATATTCCTGCTTTAGATGGTGTCAGATTAGCAATGGAGG10.6711409395973155No Hit
CTTTTAGCTCTTCTTAGGTAGCTCGTCTGGTTTCGGGGCTCTTAGCTTTG10.6711409395973155No Hit
GTGCAGGTTTGTTACATAGGTAAATGTGTGCCATGGTGGTTTGCTGCCCC10.6711409395973155No Hit
TCTACAACCATCTGATCTTTGACAAACCTGACCAAAACAAGCAATGGGGA10.6711409395973155No Hit
ACTCGCTGGTGGCCACTGCCAAGACCAGACTACGCTCGTACTCGTGCGCC10.6711409395973155No Hit
TCTATGAACAGAGATAATTTTACCTCTTCCTTTCCAATTTGTGTTCCTTTTATTTATTTTTCTTGCCTAAATGGT10.6711409395973155No Hit
CAGCGACAGTGCCCAGGGCTCTGATGTGTCTCTCACAGCTTGAAAAGCCT10.6711409395973155No Hit
ATAATGGATACACAAGCTTCATTCCCATCTATAATTTTATCTGGTACCAT10.6711409395973155No Hit
AGGAATGACTGATAGTTGGTATGAGGTTTCTTTTTGGAATATAAAATTGT10.6711409395973155No Hit
ATGAAACAAAACAAGAAACCGTCTCTACAAAAAAAAAAAAAAAAAAAAAT10.6711409395973155No Hit
GTATTAACAGTGTGGAAGCACATTGGAAGACCTAATGAGTGAACGGCACG10.6711409395973155No Hit
GAATTAATACCAATAGAAGGGCAATGCTTTTAGATTAAAATGAAGGTGAC10.6711409395973155No Hit
CGGTGGGCGGGGGCTCCCCGGCGTGCGGGGGGGATGTCAGAGGTGTGCTC10.6711409395973155No Hit
CCACTGTAGTGATGGACACCAGTTTTATACAACATAGCATAGTACTCTAA10.6711409395973155No Hit
CTGGTGGGCGGGGGGGGGGGCGGGGGGGGGTCGCGAGGGCGTGGTGGGGA10.6711409395973155No Hit
CATGTCCAACATGTCCAACGTCAGACACATGTATAGAATCACCCGTCAAGACGTGTTCTGGCATAGACATTGAGG10.6711409395973155No Hit
CCCCATTTGAGTATTTTGTTTTCAATTAGGGAGATAGTTGGTATTAGGAT10.6711409395973155No Hit
CTATAAACCATAGGAACCAATTTGATGGAATATATCTGACATTTGCTATG10.6711409395973155No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTAACAAGGGGACAAAAAAATATTATTTTGAACAA10.6711409395973155No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.6711409395973155No Hit
TTTATGATGTTGCTATGAGTTCTTGCTGGGAATCTATTTACTGAGTGTTT10.6711409395973155No Hit
GTGTTGAGGTTAGCATACGTATCAAGGACAGTAACTACCATGGCTCCCGA10.6711409395973155No Hit
GGTTTATTGAAACTGCTAGCTTTATTGACGTGGATGATGAAAGATGGCAC10.6711409395973155No Hit
GAGTGACTCTGAGTACTATCAGTACCCTGTCCACGCTACGTACAAGAAGCTCAGCGCAAAGCGTCCGGATGTACA10.6711409395973155No Hit
CAGTTTCACTGTGTTAGCCAGGATGGTCTCAAACTCCTGACCTCAGGTGA10.6711409395973155No Hit
GTGACTCCTAGAGCTATGTTCATTAATATTTGTAACTTCTACATGTCTGTTGGATTTTCCTTCATCTATGGTATC10.6711409395973155No Hit
GGGTAAGATTTGCCGAGTTCCTTTTAGTTTTTTTAACCTTTCCTTATGAG10.6711409395973155No Hit
CTAATAACAAGAACAATAATAAGTGTTCAGTCGATTGCAAACATGTCTGA10.6711409395973155No Hit
CTTCTTTGGCTGTGACCTGTGAGACACTTTCAGCAGATGAAGCCTCCCTC10.6711409395973155No Hit
GTGCGGAGCCCATCTAGTGAGATGCAGCCGGGACCCCCCTTGAGCCAACG10.6711409395973155No Hit
GTTAAGAGCCTCCGCCCGTCTCTGGGACTATGGACGGGCACGCTCATATC10.6711409395973155No Hit
GGCTGGCAGGAATGCAGAGCAAAACGCTTAGCCAAGCCACACGCCGACAG10.6711409395973155No Hit
GGATATATTTATCAAAAATTCTTTTATACAAATGTAGAAAATGCTTTCAACAAACCTAAGTGTCCTAATTACATG10.6711409395973155No Hit
TGCCTGTAATCCCAGCCCTTTAGGAGGCCGAGGTGGGTGGATCACTTGACGGGAGGAGTTATACACCACCCTGGC10.6711409395973155No Hit
GATATACAGAGGGCACATAACAAATGTTAGATCTCTCAAATGTTTTTCTG10.6711409395973155No Hit
CATATAACTGAAATACTAACAACAAATTTGAAAAATCTATCACCACACTC10.6711409395973155No Hit
AAACTCATGTTTTTTATAAAGCAGATGCTGAGTGAATTCACAGTTCTCAGCTTTTATGCCACTTTCTGACTAAGT10.6711409395973155No Hit
CCTCAGGGCAGCGGAACCGCTCATTGCCAATGGTGATGACCTGGCCGTCA10.6711409395973155No Hit
CTTCGGGCTAGTCGTGAAGTGCGTCGTGTAAACAGAGGGCACGGCAGAGT10.6711409395973155No Hit
CTACAGGTGCATGCCACCATGCCTGGCTAATTTTTATATTTTTAGTAGAG10.6711409395973155No Hit
ACTCAATACAACAACGTCTAAAACACAAAACTTCTCTCCAAGGAATGTAA10.6711409395973155No Hit
GGGAGCAGTTTCGCTGGTCTGGATCCTCCAGGAGCTGGACAACCTTGACGGGCTTTTTGTCTTGGGTTCCAGCCC10.6711409395973155No Hit
GTCTACATTGAACACATGATTCTTAAAAGCCTCATGTTTTATTTCAGAACAGGCCTCAGGAAGTTGCAGACTGTG10.6711409395973155No Hit
ATATCGAAGCTGCCACGTCCCATCAATTCAATTGGCTTATCTGGATGCAGAACTTGACTGAGAATGAGAACAAGG10.6711409395973155No Hit
TCCCTGAATGAGCCACCACTGCCAACATCATTTCACTACAAAAATCCATTGTGAATTCTAAGCAACAGTCATAAA10.6711409395973155No Hit
CAGCTTGTTTGAACAGCTCAGGATCATCCTCCTCTACAATTGTAGGTTTT10.6711409395973155No Hit
CCACTACAAACTTCATTATGTATAAATTCAGTGTCAGTATTAAGCTAATG10.6711409395973155No Hit
CAGTGACACACAAAGCAACAACACTTACAAACTCAATATACTCTCATGGCCATATGTAGATTTTAACATCACCCA10.6711409395973155No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN10.6711409395973155No Hit
CGTCTAAATATATTACCGTACCAACGGGCTCTACCCCAGTCCGCGCGCTAAATCAGGCCCGGTGCGGAACGGAGC10.6711409395973155No Hit
TTATATGTACTGTTGTCTCAAAGAAAAAAAATATAAAACAAGTAGTATAC10.6711409395973155No Hit
TGCCAGTATACTGTACCAGCATGATTTATAGAGGGAAAAACACTTTTTAT10.6711409395973155No Hit
ACATAGTTGGCTAAGGCTGAAGGATAAGCATCACATATAGACTCCAGTAA10.6711409395973155No Hit
TGTATATATAGTACAGGACCTCATGGAAACAGATCTTTACAAGCTCTTGA10.6711409395973155No Hit
ACTCTCTCTTTCTGGCCTGGAGGCTATCCAGCGTACTCCAAAGATCCAGG10.6711409395973155No Hit
TCTGGAAATTGGCAAAGACCAGAGCTACTTCTCTGAAATCACTTTCCCAT10.6711409395973155No Hit
CAGTACAAGTTTGGGGTGAAATGGATATTTTTAATCGATCTCAAATGTAT10.6711409395973155No Hit
CTCTAGACCAGCATGTTATTTAATAAAAAAAAAACTATCAACATCACAAC10.6711409395973155No Hit
GTCTCGGCCTCCCAAAGTTCTGGGATTACAGATGTGAGCCACCGCACCAG10.6711409395973155No Hit
AAACAGTAGTCATCATGATTCTGCTCAGAATTCAATTCCAGAAACTTCTC10.6711409395973155No Hit
TTCTTGCTTAGCTCACCGTTCACCAAAAGCTATCCTCCACACCCCAACAC10.6711409395973155No Hit
TTTCAATACTCTTTAAAATTCTTTGCAAATTGCCCTCGAAGTCCAGGGCCCACTGGTTGAGTGCGCAGGTGGCCA10.6711409395973155No Hit
CCATAGAAGACACCAAGTTATTTATTATTAGTAAAACAATTTGCATACCA10.6711409395973155No Hit
GCATTGGACATCATTTCATGGCTCAAGCTCATTGTCCCTAAGTCTGTTTT10.6711409395973155No Hit
GGTATCTGTGTTGAATAAAGAAAAAGGTAGCAGTGCTTCTCTGGTCCTCA10.6711409395973155No Hit
CATGGAAGTATTTAACATTATATATTGGTACCCCCTACAAAAATGCTTAG10.6711409395973155No Hit
ACCCCCGGTCGTGCAGCGGTGATACTGGATTGGTGTATAGGGCCGGGAAT10.6711409395973155No Hit
GCCCCAAACTGTGCAAGCAGAGGCGACTCAACGGCTACGCCTTCTGTATCAGACACGTTCTGGAGGACAAGACTG10.6711409395973155No Hit
GTATATTAGTTTCTTATTGCTGCTATCACCACAAACTTAGTGGCGTAAAA10.6711409395973155No Hit
GTTTAGTGACTTTTCTGAACTCATTATGGAAAAGTGGTATTCTCTGTCAT10.6711409395973155No Hit
GGAAATTCTGATTAAGCGAAAGTGGTATCATCCTAGGTAAGCTTATTTCA10.6711409395973155No Hit
GTCCTGCATCCCTCCCCCACTGGAGTGATTTCAGTGAATCAGACAAGCAA10.6711409395973155No Hit
TCTTTAACCAGCACACTGACGGCCTCTGCTTCTTCCCTGGTCACACAGCTGAGAAGGTCTTCATAATACAGAAAT10.6711409395973155No Hit
GATTATAACTATAACAAAAAATTTTATTAATGTATAGAAGATAAATATTATTGTAAAATAAATAAAGAACAATGC10.6711409395973155No Hit
AGATGCTCATTCAAATCCGTACATCGATTACGCAATTCAATTTCAGAAGCTCTCAGCATAAACGCTTCCCCATC10.6711409395973155No Hit
TCAGATGGGAGAATGATTGTGGGAACACTGAAAGGTTTTGACCAGACCAT10.6711409395973155No Hit
ACTGTGCAATTTTTAAGTGACATATTATGTCAGATTAAAATTTAGATACT10.6711409395973155No Hit
GCCCCGGATAATCCTCTGAAGGAAGAGCATTTAGTCCAACTTAATGAAAC10.6711409395973155No Hit
TGTCAACAGTGGCCAGCCCCCCAACTATGAGATGCTCAACGAGGAGAACGAGTTTGCTCTGCTGGGGGCGCCCCA10.6711409395973155No Hit
GTAGGAAGCAGAAGAAAAAAGACAAGCTAGGAAACAAAAATCTAAGGGCA10.6711409395973155No Hit
ATATAGGCCTCGCCCGATGACTAGGAAGAGGCAGATAAAGAATATTGAGG10.6711409395973155No Hit
AAGCAGCACTAAAAGCACTCTGAGTCAAGATGAGTGGGAAACCATCTCAA10.6711409395973155No Hit
GCGGAGCCGTGGGGGTGGAGAGGCGGGGTGGGGGGGGGGCGGGGGTCGCG10.6711409395973155No Hit
TTGGCAAGGGAACAGCTGTAGTAGAGTATGGAAGATGAGCAGAACTGCCTGTATCCCACAGCTTGCCATGCTCCT10.6711409395973155No Hit
CCCTTGACTAAGCACATGCAGGTTCCATATTCCACCATGCTCTCAGCAGA10.6711409395973155No Hit
GCACAAGATTTCACATCTTTTTCTTCGGCATCCACCTGCGCAGTATATTT10.6711409395973155No Hit
GATTTTCATAATTCCAAAACAGAGTAAACTGAAGAATTACACACAATTCT10.6711409395973155No Hit
CTCTTCCTCCTATTGGTCTATCAAATGGTCCCGGTCGCTGTCCCAGCAAT10.6711409395973155No Hit
CTAAGATTCTATCTTGGACAACCAGCTATCACCAGGCTCGGTAGGTTTGTCGCCTCTACCTATAAATCTTCCCA10.6711409395973155No Hit
GGATACTAGCCTTCAGCTCCATAAATGTTGCTGCAGAGGACATGATCTCATTCTTTTTTGTGGCTGCATAGTACT10.6711409395973155No Hit
AACGAAGACTTCCGCTATGTGTGCCCATATGCTAGAATCTATAATGTCCC10.6711409395973155No Hit
CGTACTGGAGAATGCTGTTCTAGAATTCTTGTCTTGTTCTGCCCCCAGCCTTTCCTCTCACCCTTCCTGGGG10.6711409395973155No Hit
GTATGAGTTCTGAAACATCACGCCATACCAGGAACTTGAGGATATAACTTTTCAATGAAAGACTCCGAAACACA10.6711409395973155No Hit
CCAGACGAGCTACCTAAGAACAGCTAAAAGAGCACACCCGTCTATGTAGC10.6711409395973155No Hit
GCATCCAGAAGCTTCGTTAGCCAGGTGGTCCCTTCTACAATAGAGAAGCT10.6711409395973155No Hit
GCCAAGTATGGAGATTACAATAAAGAGATTCATAAGCCAGGCTACCTGGC10.6711409395973155No Hit
CACCTGAAGCCAGTTGGCAGGACAGGTGCAAGCCACCACCATAAGTGCAGTCATAGTGGCCGATGATGGAATTGT10.6711409395973155No Hit
CTGTTTAAGAGATGTTAATTTGATTAAACAGTTTATCCTTAATAACCTGA10.6711409395973155No Hit
AATTCGATCCTGTAAGACTTTAAAACATGAGATCGGACACATATTTGGACTGCGACACTGCCAGTGGCTTGCATG10.6711409395973155No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAT10.6711409395973155No Hit
ATTCATACCTGTTGTACACTTGGGTGAAAAGTATGGCAGTGGGAGACTAA10.6711409395973155No Hit
ACTCTCAACATCAAATATCTCAACATAATCGACAGGTAAAACTTCGTGGA10.6711409395973155No Hit
CCCAAAGTGCTGGCCACTTCTTAATAAGGAAAACACATAAATACAGACTA10.6711409395973155No Hit
ATTCTGCTCAGTCTACTACCAATCCCACAAAGCCCTCCCCACCATCACTC10.6711409395973155No Hit
AAATATGTGGGTCCGACCCTCTAGAACGGGCAAGCTAAATTCAATTTTTC10.6711409395973155No Hit
GGTATCAACGCAGAGTACGGGTGTTTTATATAAAAATTTATCTAGTGTTG10.6711409395973155No Hit
GGAGAAATAACTTTATTTGAATAGGACCCAAGACAGCATATTGGGCTAAGGAGGAGAGGTAAGGTTCCAAAACCG10.6711409395973155No Hit
TTTATTTTGTGCTCATTGAATTGAGTTGTGCTGAACTAAGCGGCCACAGT10.6711409395973155No Hit
ATTGTGGTGCACCATGGAAAATCCCAAAGAGGCCATAGCAAAGGTGGACA10.6711409395973155No Hit
CCCAATTAGGAGGGCACTGGCCCCCAACAGGCATCACCCCGCTAAATCCC10.6711409395973155No Hit
CATCTAAGCAAGATGGACCTATGCCAAAACCACACAGTGTTTCACTTAAT10.6711409395973155No Hit
TTTCTATCCATCCTTCTCCCTGATTGGTGCACTCTGATCTCCACTTGGAG10.6711409395973155No Hit
CTCTTTGGACACTAGGAAAAACCTTGTAGAGAGAGTAAAAAATTTAACACCCATAGTAGGCCTAAAAGCAGCCAC10.6711409395973155No Hit
ATTCTGCACGGTAAGAATTCATTTTACAGACATTCTTTATCAAGAGGTCGGCCCTTCTTTTTCAGGCACATAAGA10.6711409395973155No Hit
GAAATTAAATAAGAAGCCCGTATAGCGCACCCTCTAATAACAGCCTAGAGATGTAACCAGACACTGATGCAAA10.6711409395973155No Hit
ACAGAAACATGCATCATGAGAAGCAAGAAGTATCACCCATCCCTTCTGCA10.6711409395973155No Hit
GACCAAGATGTTGGAACTCTCTATGAGTGTTTTGGCAGTGATGGTAAACT10.6711409395973155No Hit
AGGCTGAACTGATCTCAGGGCCCAGGCAGGACAGCCGAATATGGAAACTCTTGGGTTTTGAGTCGACAGATTTGT10.6711409395973155No Hit
TAAAAGGCCAGATAATTATTATATGATCTTCATAACAACATGGTATGATT10.6711409395973155No Hit
GTCAGAACGGTTCGGACGGGAATAGATTAGTTAAAGGACTTTATTTGTTGTGTAAGAAATACCAGTAATCAGT10.6711409395973155No Hit
CAGTAGACAGTCCCACCCTCACACGATTCTTTACCTTTCACTTCATCTTGCGCTTCATTATTGCAGCCCTAGCAG10.6711409395973155No Hit
TATGCTGAGGAGCCACTCGGCTTAAAGAAGGTTGTAAATAAGCCCCAAATACATAGGGACCAGGCGCTGCTTTCT10.6711409395973155No Hit
GATCAGCTTTGACTGAGAAAAACTTAAATTAGCATTTTGGAATTTTGCTG10.6711409395973155No Hit
ACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10.6711409395973155No Hit
GGTATCAACGCAGAGTACTGTTTTGTTTTTTGTTTTTGTTTTTTTGGGGG10.6711409395973155No Hit
GGCGAACATTGGTGAGTGGGTAGATAGCTCGCGAGAAATACAGACCTAGC10.6711409395973155No Hit
TATCAACGCAGAGTACGGGTGCCATGGTTGCTTTTGAGATAGATTGTAGT10.6711409395973155No Hit
TGCAAAGACCATGCGCCGGAACACCATTCTTCGCCAGGCCAGGAATCACAAGCTCCGGGTGGATAAGGCAGCTG10.6711409395973155No Hit
TTGGAGAGGTGGGGGACGCGCCCGGTGGCTACACACTGTAATTACATCAC10.6711409395973155No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTATTTATTTTAAAAAAAAA10.6711409395973155No Hit
GTTTGCAGACAAGGTCCCAAAGACAGCAGAAAATTTTCGTGCTCTGAGCA10.6711409395973155No Hit
GCGCGGGGGCGCGGCGCGGCCCCGCCGCCCGGGGCGCGCCGGGGGCGGCG10.6711409395973155No Hit
CCTTACTACAGGCACCCTTCTAAGTGCTTTACATTCATTAACTCATTATC10.6711409395973155No Hit
TGACGAGGATGATGACATTGCCCTGTTTGGCAGTGACAATGAGGAGGAGG10.6711409395973155No Hit
GAATTACAGTGTGCTGCAATGAGAAAAATATTATAACAACAGTAATTATA10.6711409395973155No Hit
ATTTTGTAGAGATGGGGCCTCGCTCTGTTGCTCAAGCTAGTCTTGAACTCCTGGGCTCAAGTGATCCTCTGGCAT10.6711409395973155No Hit
TTTTAATTAAATTCAGACAGAAAGCAATCCCCAAGATATCCTGTAAAATC10.6711409395973155No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)