FastQCFastQC Report
Mon 12 Sep 2022
EGAF00003683659

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003683659
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8605885
Sequences flagged as poor quality0
Sequence length35-76
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN2166432.517382000805263No Hit
TGTGTTGGGTGTGTTTGGTGTGTTGGGTGTGTTTGGTGTGTTGGGTGTGT272390.3165159655282403No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)