FastQCFastQC Report
Sun 11 Sep 2022
EGAF00003683944

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003683944
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4969392
Sequences flagged as poor quality0
Sequence length35-76
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTGTTGGGTGTGTTTGGTGTGTTGGGTGTGTTTGGTGTGTTGGGTGTGT255180.5135034627978634No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN208060.41868300991348645No Hit
TGTGTTGGGTGTGTTTGATGTGTTGGGTGTGTTTGGTGTGTTGGGTGTGT51210.10305083599764317No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)