FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003684087

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003684087
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences98
Sequences flagged as poor quality0
Sequence length48-76
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTTCTGAGGGTTAGGCCAAAAACAGACCATTACTGAGGCGAGACATGTC11.0204081632653061No Hit
GGTGAAATATGCTCGTGTGTCTACGTCTATTCCTACTGTAAATATATGGTGTGCTCCCACGCTCACTCTTATAAA11.0204081632653061No Hit
TCGGTAGTCCTCTCCGCTGCTGTCGCCAGGAGTCACTTCACGAGAAGCCA11.0204081632653061No Hit
GGAGAGGTGTGAAGAAATCCTGCATCTCAGTCCCACACAGCCAGCTGTCTAAGGCTTTACAAGTGATGAGAGACT11.0204081632653061No Hit
AGCTAAATATGCATTCAAATGTGTGAACACTGTCTTCGTTAAAAGTTTAAATGACAACCGTACATTTTAATTA11.0204081632653061No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT11.0204081632653061No Hit
GTAAATATTCAGGAGGACTCCCTTAAAGGGTGTAATGAAGCAGGTAGCCG11.0204081632653061No Hit
CCCTAGGGTAACTTGTTCCGTTGGTCAAGTTATTGGATCAATTGAGTATAGTAGTTCGCTTTGACTGGTGAAGT11.0204081632653061No Hit
TATTAAATAAGGTGAATTTGGGACAAATGAAAGGTGAGATGAAGGCAAACTACTGTCAAGGGATGATCTGAGC11.0204081632653061No Hit
GGAAAAACTATCCAACTATGGCCAATATTGAAAGTAAGAAGAAGTTAAAA11.0204081632653061No Hit
GTGTGTAAGCCAGAAGGGCATGCTCTCGGGTCTGCCCATTCTTGGAGATACCAGCTTCAAATTCACCAACACCAG11.0204081632653061No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.0204081632653061No Hit
CCAGAGTGCCCTTTCTGATTCTTGAAGTAGATGAATAGCCCGGCCCCAAGGAAGAGCCGGCCCCGCACAAAGGCC11.0204081632653061No Hit
GCTATGTTGGCCAATGCACCTTGAGCCTCAAAGCTGGCAAATCGTCCAAATTCTTCAAGCCGCCAGACCGTCTC11.0204081632653061No Hit
CGGCAATCCTGGCTGATGACCACGCCCCACCCTCCACCACACCTTTGCGG11.0204081632653061No Hit
TAGGTATTTTATTAAATTGGGGTGGATTCTGAATTATTTCAGAGAGTAAG11.0204081632653061No Hit
TCTTAAATGTGCTCTCTTCCCACTTATCATGCTATTTGCCATCGGACAAAGTGTACATTTAACTATAG11.0204081632653061No Hit
GGTATCAACGCAGAGTACGGGGGGAAATCTATCTGTCTGTATGGTATGGT11.0204081632653061No Hit
AAATTAATCATTTATACCATTTTACATAGTGAAATGTAATATTACTTCAG11.0204081632653061No Hit
GTGGGCTCCAGTTCAGACAGCACCACCACTAGAGCGTGTGCCACGCCGGG11.0204081632653061No Hit
AAATCACAGAAACTTTGTATGAATACTGTATTAAGGCCATTCCCGAATTT11.0204081632653061No Hit
GTTCCACACTGCCACATTTCCGTATTGATGCATCTTTTCCCACCCTGTCA11.0204081632653061No Hit
CACATCTCCGAGCCCACGAGACAAGAGGCAATCTCGTATGCCGTCTTGTG11.0204081632653061RNA PCR Primer, Index 48 (95% over 24bp)
TCTACGAGGGGTATGCCCTCCCCCATGCCATCCTGCGTCTGGACCTGGCT11.0204081632653061No Hit
GATTTCTACCCGACCAACAGTTCCTTCAGCTTCCATTTCGCCCCTCATTT11.0204081632653061No Hit
GTGAACCATATTTCAATTTATTGACATTGTCAATTTATGAACAAGACAGG11.0204081632653061No Hit
ACGCTGGGGAGGGAGAGAACTAATGTTTCTCGTGCTTTGTGATCTGTTCA11.0204081632653061No Hit
TGTAATCCCAGCACTTTGGGACGCCGAGGCGGGAGGATCACCTGAGTTTG11.0204081632653061No Hit
TAGGAAGGCTTTGTGGAAATTTATAGATACTTAAATGAGATTTTGAAAGCTGATTGAAGATTTAACAAGTACTC11.0204081632653061No Hit
CCAGTAGGTAGTGTCAAGCCAGAGATTCGGGGCAGTAGATAAATGTTCAT11.0204081632653061No Hit
TTTCTATGTATACCAATACTACGAATTAGAACATCTTAAGTCTTTTATTC11.0204081632653061No Hit
GCCGTGGATAAGTGGTTCCATCACCAGAAAAACTAATGAGATTTCTCTGG11.0204081632653061No Hit
CAGAAATACTACTTTGGGAAACAGTCTTCAGGAGAGCCTAGATGAGCTCA11.0204081632653061No Hit
GTATGACACAGATTCTAATGTGGACATGCTCAGGCACGTCAGAAAAGGAA11.0204081632653061No Hit
CTTCCACTATGTCCTATCAATAGGAGCTGTATTTGCCATCATAGGAGGCT11.0204081632653061No Hit
CCCTGGTGGTTGCATTTTTCCTCCCTTCTGCTACTGGCAAAAGGATCTTTGTGGCCAAGGAGCTGCTATAGCCTG11.0204081632653061No Hit
TATTTAAGGAAATGGGAATTCTAATTTACTACTGGTGGGAGCATAAACTG11.0204081632653061No Hit
TATCAACGCAGAGTACGGGAGTAGCCAGTTGTTGGCTGGAAGCCTTACCGTAACCAACAG11.0204081632653061No Hit
GGTTATTAGTTTCCCAGAGCATGGTGTTCTCGTGTCGTGAGCAATGTGGT11.0204081632653061No Hit
TTACTTGTCTCATTCCACATGAGAATAAGGAAAGACTCTTTGCAGGCTCT11.0204081632653061No Hit
ATTTAGCAGTAAACTGAGAGTAGAGTGCTTAGTTGAACAGGGCCCAGAAGCCCGTACACACCGCAACAAACCAAC11.0204081632653061No Hit
GGGACAATTAGCTCGATCCTTCTCCATTACTCTGAAATCCACGGGTGGTT11.0204081632653061No Hit
GTATAAATTTGTATTGAAAGGCAAGGATTTCAGGGAATAACAGATTCTGG11.0204081632653061No Hit
AGAAAGAACTCCTAATAGGAATACTCAAGAAGTGTGAACGACCCAAGCTG11.0204081632653061No Hit
GTACTAAGAACTGGGAAGAGCTAAGAAAGAGCCAAAGATTGAGGTCTGTGTCTTATAGACATCTCAGAGCACATA11.0204081632653061No Hit
GTATCAACGCAGAGTACGGGGTCGGCAGAGAAGGCTTCAGACCGGCGAGCAGAGAGCCTCGCCATTGCCGATAGG11.0204081632653061No Hit
CCCTTACCCCACCACCACCAAACTAAAGTGACAGTTCCCTTTCAAAATTC11.0204081632653061No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTA11.0204081632653061No Hit
GGTTAATAAACACCACTTTTTGTTTCACCCGGTTTAAGTTAGGTTCTGTCACTTATAACAAAAAGAGTGCTGA11.0204081632653061No Hit
AAGACGCCCTGTGCCCACCCCTACACACTCCTTTCTGCAACCATGTGGCAACTGACCCAACATTAGCAATGGACC11.0204081632653061No Hit
CTATAGTACTGGGTTTTTCATTTTTACTACATTTAACCTCAACCATAAGC11.0204081632653061No Hit
GTGCAAAGCTATGTATTTATCATGGTAACACTCCAGTGTTAGAATAGTTT11.0204081632653061No Hit
CAACACACCCTGGCACAGGGTGGGGCTGAGGGCCCCAGGAAACAAAGATT11.0204081632653061No Hit
AACAATATGTACAAAAATATAAAATGTAAATAAAAAATACAAACAAATTT11.0204081632653061No Hit
AGAAAGGGCTGTCACAGCAACTACGCTGAGCTGCTCGCTGTCCAGCTGGCCCTCTAACAGACCACGTCCAAATTC11.0204081632653061No Hit
TCACTGTATAAATAGGAGAGGATGAGAGCCCAGAGGTAACAGAACAGCTT11.0204081632653061No Hit
CAAGCACTACGAGCTACCACCCCTACGACCAGTAGCCCAGCACCTGCAGTATCCACTTCAACATCATCATCCACC11.0204081632653061No Hit
AATGAAAGCTATGATTAAAATGGTGATGAAGAACACATTAATTACAGCAC11.0204081632653061No Hit
GGTCACCATCATCTTCATCTACGAGAAGCGCCGGAAGCCCGAGGACGTCC11.0204081632653061No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTAAAT11.0204081632653061No Hit
GGGTGATACTTCTTGCTTCTCATGATGCATGTTTCTGTATGTTAATGTCT11.0204081632653061No Hit
GTGCTCATCGGCTGCAAGACAGACCTGAGGAAGGACAAGGAGCAGCTGCGGAAGCTCCGGGCCGCCCAGCTGGAG11.0204081632653061No Hit
TATTGAGGCTGCTTCGTGTCGGCACGAAGTGTCTTCCGATGCAGTGTCCA11.0204081632653061No Hit
GTATTATTCTAGGTCTGAGGATTACAGAATATTTCCTAATAGAGATTTGC11.0204081632653061No Hit
GTTTCATTCTTCTCCATCTGTCTGGTAAGGCTGCCTCCGACGTTCATGGT11.0204081632653061No Hit
GCTATGTGGTATGACCCTCATTTTACAGATGAGGGAACCAAGTGTTAGAA11.0204081632653061No Hit
GCCTTACCAGAGGTGCAAATTGAGCATGACCCAGAATTAGAAAAAGAAAG11.0204081632653061No Hit
TACCCAGGGAGAATGAGAAAGTCATTGTAGGTGAGGCCGTCTCCGCAGTT11.0204081632653061No Hit
GTCCTAGCCAATGGTCTGGACAACAAGCTCCGTGAAGACCTGGAGCGACTGAAGAAGATTCGGGCCCATAGAGGG11.0204081632653061No Hit
CTTAGGTATATTTAATTGGAAATATATCCTCAAGTGTCACCTCTTCCAAGAAGCCTTTTTCCGTTTTTTTTCCCT11.0204081632653061No Hit
GTGGTGGCGGGGGGTGGGGTGTGCCTGGGATGTGCCTGAAGTCATAGTAA11.0204081632653061No Hit
GTGTGTGGTCACAGGACAAACGGAAGGGTCGTTTTGATGTCAGGTGGATT11.0204081632653061No Hit
GAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCG11.0204081632653061No Hit
ATGAAGAAATGTGCCTGTAAGTAGTTCAGTAAAGTAAGTACATTTTTAAAGAAAAATCCTTTCTGAATAAGAGC11.0204081632653061No Hit
GTGTAAGGCGGTTTCAGTGGAGAGATGTGTGGAAGGGTGCACCCCACGAT11.0204081632653061No Hit
TTATAGAGATGGGGCCTCACTATGTTGCCCAGGCTGGCCTCAAACTCCTGGGCTCAAGCAATCATCCAACCTCAG11.0204081632653061No Hit
ATTTAATATATTAATCATAAAGAAGATTCCAACTAAATATAACTCTAAGT11.0204081632653061No Hit
CTGTGTCCCTTTGCATCCAAATATTATATCCCGTACTCTGCGTTGATA11.0204081632653061No Hit
ATTTGACTCAGTGGGATATAGCTGTTATAAGTAATAGGGCACAGATGTGCAGTAGAGTCTTGTTTAATGGCATTT11.0204081632653061No Hit
AGTCAAATCTAAGCATTTAAAAGACAGCATGTGCAATGAATTCTCACAGA11.0204081632653061No Hit
TTTTTTATCTGTTTTTATTCTTATTTCATATTGTGAGTTCCATAAGTAGG11.0204081632653061No Hit
CTCCAGGATATTCCTTGGGCCTGATTACAATCCACAGGTGAAAAGACAACATACAGAACTTCACGTAAAACAGTT11.0204081632653061No Hit
ATAAAATTCTGCCTTGCTTTGAAACAAAAATCTGCCTAACTGTAACTTCTAGTTTTTACCATTCTCTTTTTCTC11.0204081632653061No Hit
CAATAGCAGATGAGAGACTATGCCTCAGTCCTCTGAGGGGATGCATTTCC11.0204081632653061No Hit
GCCGTTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACTGCTTTGCACATTCTGAATGATATGTTAAAGAAAGT11.0204081632653061No Hit
ACCTTCAGCATGTCCAGAGATAGCTGATGAGCAGGAGGATAGAAACTCTC11.0204081632653061No Hit
GGGTGGCAGGTGAGTGTATCGGAATGTGATGTGATTCCTCGGGCGGTGTT11.0204081632653061No Hit
TTATTATACTGAGGATCAAATTCAGAAGCTCCAGCCAAAACCATGATAAG11.0204081632653061No Hit
ATCAATGACAGCATGAGTAGCAGCATGTTCAGAACACGCAATTTGGGCTG11.0204081632653061No Hit
GTGCAAAGATATCGGTTGCTGTCTTCTGGCCTCCAGCAGAATGGAGGCCC11.0204081632653061No Hit
CTTTTGTATCATTCAACAATTAAACCATCAGCTGAAAATTCCCAACTAGCTACTATCGCGATGCCTATCGGGAA11.0204081632653061No Hit
AGTTTATATTGAGGAGGTAGCCATGGGAGGCAGCTCTCTGCTTGAAGGAC11.0204081632653061No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT11.0204081632653061No Hit
GTCTACTCCTCAGCCAACAGCACAAATAACTGTATCATATCCAACACCAAGGTCCAGTCAACAGCAAACCCAGC11.0204081632653061No Hit
TCTTTTTTTTCTTGAGATGTTAGTGCCAGAATCTGAACAGTCTCCTTTAT11.0204081632653061No Hit
GGGTGGCGCTGGGTTGCTCTGTGTGGGCTTCTTCCGTCCCTCCAGCCCGG11.0204081632653061No Hit
GGCCTTTAATGTAGCACACTTAGTGGCTAAAAGAGCCCTAGATCGGGGCT11.0204081632653061No Hit
AATTTAAGAAAACCATTTTAAATAATGCACAGTTGCAGCCTGGAAAAACT11.0204081632653061No Hit

[OK]Adapter Content

Adapter graph