FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003684238

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003684238
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences82
Sequences flagged as poor quality0
Sequence length60-76
%GC40

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATTAGTCTGTGATGTGATATGTAGAAAATTCAGATAGTGTTGTGAGAACTAGGGCTACTCTGAATCAAATGAT22.4390243902439024No Hit
CTGGCAAACTGACAAATCTTTAACTATAACATGCTAAGATAGCCTATATA11.2195121951219512No Hit
TGTGAATGTGTTCATTTTTCATTCGGACTTTATACTACTTTTTATTTTTA11.2195121951219512No Hit
CAGTTGGACCAAGTACAGATGGAGGGGCTGGCCCATGCAGGGCCTCGGGG11.2195121951219512No Hit
ATTCTATAATTAGTAGTAATTTCTTTTCAGTTCAGAATACTTTTTGTACTATTTGATGCTTAAAATGATAGATG11.2195121951219512No Hit
GGTTGTTGGTGTGACCACACTTCTTCTTGCGGCAGTTGACAGCACGAGGG11.2195121951219512No Hit
GAGGTCCACAGTGCGGGACACTGGGCGCCAGGGCCGTGGAAACGCCCCCAGCTGAAGCAATCTCTTCCAGGTCTC11.2195121951219512No Hit
ATATGAATCATATATCACAAAATGATTCATTCATTATAAAAAATTTCCAA11.2195121951219512No Hit
GTCCTACGAGATGGGTTTAACTGAGATTGGACAACACTAATCACAGAAAC11.2195121951219512No Hit
CTACACAATAGGATTCCTCTGTTATCCCTAGTGTAAGTGGTTCCGTGCGA11.2195121951219512No Hit
AAAATAGAACATAAACAAATGAAATCAACACTAATCCCATCTCTATCAGA11.2195121951219512No Hit
GTTTGAGAACTATGTGGCAGATATCGAGGTGGATGGAAAGCAGGTAGAGT11.2195121951219512No Hit
CATCTACGGCTCAACATTTTTTGTAGCCACAGGCTTCCACGGACTTCACGTCATTATTGGCTCAACTTTCCTCA11.2195121951219512No Hit
CTTCTGGTCATTTTCCCATTCTCTTAGGAGCTACTTCTGACTTGTGTTGC11.2195121951219512No Hit
ATCCAGAGGACCACTGGCAGCACCTGACATATAGTAGCAGTTAGTAAATA11.2195121951219512No Hit
TGTTGTAACATAAAATAGCAAATTGTATTCTACTATAACAAACATCGCAA11.2195121951219512No Hit
GATTACAAACCTCAAAGCCCATACACAAACAAGATCTTGTCCACCAAGCACAACATGAAATAAACTTATATATTC11.2195121951219512No Hit
CTATGATGCTAATTTCGTTTCTCAAACCTTCCTCTCTCAATCTTTGATCT11.2195121951219512No Hit
AGATAGTACAGCTTACACAGGAGAAAGGGATGTCTGAGCACAAGTGGCTGAGTTCCTAGTGACTTTATGAATCA11.2195121951219512No Hit
GTAGTAAGTCTAGCACATAGTCTCAGCCACTTAAAACAAAAGTTTTTTTG11.2195121951219512No Hit
GTGATGAATTAAAACAAATCCAGATCAAACATATAAAAAAAAATACAAGA11.2195121951219512No Hit
NCTCGGGTATGCTGTTGTGCAATTGAGACTGGAAAAGGAGATGGTTGAAA11.2195121951219512No Hit
GATTATAAAAAAAATGCATAAAGAATATAAGCGATCAAGTTTTGAAGACA11.2195121951219512No Hit
GGTCAGGCTGGTCTCGAGCTCCTGACCTCAGGTGATCCGCCTGCCTTGGC11.2195121951219512No Hit
TTAAAACAGAACTAAAACAAGTAATTAAAAAATTATAAAAAAAACTAAAA11.2195121951219512No Hit
GGTGGGGTCACTTATACCCATCAGTCCTGTGCAAAGGTCCTGGGACTGGC11.2195121951219512No Hit
GTTTCTTTGGATTGTAGTAGTAATAGTGTGGAATTTAAGTTACAGTTCAG11.2195121951219512No Hit
CTTTTTACCCCCGCTGTTTCCCACCCCCTTACTCACCAAATTGATTTTCTAGGTGTTATGGGGCTTGAGTCTCC11.2195121951219512No Hit
CCGTACATGTTTATTTAATTATTTATGTTTTTTTTCTACAAAAAAATAAA11.2195121951219512No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.2195121951219512No Hit
CACCAGTCTAGCATCAGACAACAGTCAGCGCTTTCGAGAAACCTGTTTTGCATTTGCATTGACACCACAACAA11.2195121951219512No Hit
CAGGAGTGTCAGTGAATTTTTATGCTAAAACAAGAATGATAAATAGAAAC11.2195121951219512No Hit
ATTTTGTATTTTTAGTAGAGATGGGGTTTCTCCATGTTGGTCAGGCTGGT11.2195121951219512No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGAAAAAT11.2195121951219512No Hit
ACTCCATCTTGTGGATAATGTTCCAGATGAGCATGGCTGCCGCCAGCGTT11.2195121951219512No Hit
AAAAAAAACAAAAAATAAAAAAATAAAAACAAATAAAAAAAATAAAAAAA11.2195121951219512No Hit
GTCTTACTCTGTCACCCAGGCTGGAGTGCAGTGATATGATGATTGTGGCTCACTGCAGCCTCAACCTCCTGCACT11.2195121951219512No Hit
GAGTTGACTTTCCATCTTCAGTTCGATTACATTTATTGACCAAAATGGCA11.2195121951219512No Hit
ATAAAATTCACATTCAATTGCCTCCTAAGATTGACCAAACAGTTACCATG11.2195121951219512No Hit
GTACGAGTACCGTCATGTTTCAGCAAAGCACATAGCCCAAAGAATACAAAAAACTATGGACGGAACCTCCTCAG11.2195121951219512No Hit
GTGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGG11.2195121951219512No Hit
TAACGGGATAAAGAAATGAAGAAAAAAAGAAAAAAATAAAAAAAATGGAG11.2195121951219512No Hit
GTATGCAATGAGCGATTTTAGGTCTGTTTGTCGTAGGCAGATGGAGCTTG11.2195121951219512No Hit
CTGGACCACCAGCCCCAGCAAGAGCACAAGAGGAAGAGAGAGACCCTCACTGCTGGGGAGTCCCTGCCACACTCA11.2195121951219512No Hit
GAATAAATGATGTTTCTCAGGCTTCAGAAGAACTCTGAAGGCCTAATTTCCCTCTGTAAATAGCAAGTTTGGTTT11.2195121951219512No Hit
GAGAAGTATTTCTCGTTTTCATTGGAGATCACAGCATACAAAAGCCAATC11.2195121951219512No Hit
GTCTCACTCTGTCGCACAGGCTACAGCATAGTGCCGCAGTCTCGGCTCAA11.2195121951219512No Hit
GTTATCAACTCATAGTACGGTCAATAAAATTTCAATCTGGAAAAAAAAAA11.2195121951219512No Hit
AGTAGTACCTCCTCCGGGATCTTCTTAGTCAAGACTGTTTGGTAGATGCA11.2195121951219512No Hit
TGAGGGTGGTGTCCATGGCCTGCACTCTTACGAAAAGCGGCTGTACTGAG11.2195121951219512No Hit
GTCTTGGTTTGAAAGTCACTCATATGCCTTACGAGGCTCTTGAAAGAGTAGAAAGGGGGCAGCCCAGGAGAGGGC11.2195121951219512No Hit
ATCTTAAGCTGTACAGGCTTCTAGGGTTAATGGTATTCCATACGGGTCAGTCTTAAATTTAGATCAAGAAAGACT11.2195121951219512No Hit
ACTTAAGAGTTGGCATTGGGGCCCTTCTTCTTGCCAAAGGTGGGCACAAC11.2195121951219512No Hit
GTATCAACGCAGACTACTAATAAATTTTTTTTTTTTATTTTTTTTTTTTT11.2195121951219512No Hit
ATAGGTGTATGAACATGAGGGTGTTTTCTCGTGTGAATGAGGGTTTTATG11.2195121951219512No Hit
CTTTAAGAGATGGCTGTTAGACAATAAGGCAATCTGATGAATAGTATTGG11.2195121951219512No Hit
GACAAGCCATTACTATCTCGAGCTCAAGAACTAGATCAACGCTGCGTATA11.2195121951219512No Hit
CTTCATGATTTAAAATCTGCTGTCCAGCACTTTTATAATACAAATAACACAACATCGTACTTTTTCAATTAAAA11.2195121951219512No Hit
CAGCAGTGGTCATTCGACAACGAAAGTCATACCGTAGAAAAGATGGCGTG11.2195121951219512No Hit
TTAGATAAGTGTGGATTTAGCCGTGGGATTGAGAAAGTACTGTCCCTGATTGGACTTGATATGCCAGCTGTCTGG11.2195121951219512No Hit
TCTCAGAACTGTTGCATGGATCCTGTGTTTGAAACTGGGGAGACAGAAAC11.2195121951219512No Hit
GTTCAAAAACAAGCGGATTCTCATGGAACACATCCACAAGCTGAAGGAAGACAAGGCCAGAAAGACGCTCCTGG11.2195121951219512No Hit
ATTCATATCTCTACGCTGCAAAATTTGGGTCTCAATTTTTACTGTGCCTTTGTTTTTACT11.2195121951219512No Hit
TACTAAAAATATAACAAATAAATAAAATAAAAATAAACAAAAAAATAAAA11.2195121951219512No Hit
GCATTGTATTAGCAAACTCATCACTAGACATCGTACTACACGACACGTAC11.2195121951219512No Hit
CAGCTATGTAATCGCCTCTACAGTCCAGCAGCTTCCTAAAGGAGGATTCTCAGGCTCTGTCCCTCCCATCTCCCC11.2195121951219512No Hit
TAAATAAAATTTTATAAAGAAAAAAAATTCAAATAAAAAAAAAGATAAGC11.2195121951219512No Hit
GGCTAGGTGTGCTCCGACTTAGGGTGGTGTTGGATCGCCGCGGGGTGGGA11.2195121951219512No Hit
GGCAGAGGAGCTGTCCTAGCCTCGCGCCCCCCGACTCATTCTTGTGGCGT11.2195121951219512No Hit
CTAATAAGCCATTAGACATTATCACAAATCTGAAATAATCATGACTTTTC11.2195121951219512No Hit
CTAGAAGTCGTTTTGAAAGATGTCCTTCAAGAACCCAAAACTGAAGATAT11.2195121951219512No Hit
CTAGATTCTGGGTAGACTTCTTTAACTAATCTTTTCAGTTCTTTCAAGGTTGAATCAATACAAGTGTAGATCTAG11.2195121951219512No Hit
ATGCAATGCGGGAGTGGGGGTTAGGATATGCTGAGTAGATTCTTGCTTGA11.2195121951219512No Hit
GTTTAAAAATTTAAAGAAATAAATAAACACATAAATAAATAAACTAATCA11.2195121951219512No Hit
GTGCCACACCACTAATAATAAATAACCACAGCCAGGAGAGGGAAGAGCAGAGACAACAGCAATGAAAGGAGGGAT11.2195121951219512No Hit
CTTGTAGAGAGAGTAAAAAATTTAACACCCATAGTAGGCCTAAAAGCAGCCACCAATTAAGAAAGCGTTCAAGCT11.2195121951219512No Hit
GCTGCAATGCTAGATACTCAGGTGGCTGAGGCAGGAGAATCACTTTAACC11.2195121951219512No Hit
GTGCTTTCCTGTTTCTCAGTCTCACATTTCTCAACAAGGCAAAAACAAAGAGCGTTGAAGTTGACTCTGCTCTTG11.2195121951219512No Hit
CTCCTATGTAATCTATCCCAAATCCAAAAAAATGAAACTGTCCAAAACCAAAGGTTCTGCAAAATCATGATTTAA11.2195121951219512No Hit
TATCTGAACAATTTTGATTTTTGATAAGTACCTGATTTGATAGTACAGTA11.2195121951219512No Hit
ATTTTGTTTATATAATCAAACAAATTATAAACTTTATATCAAATATACGA11.2195121951219512No Hit

[OK]Adapter Content

Adapter graph