FastQCFastQC Report
Sun 11 Sep 2022
EGAF00003684284

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003684284
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2930986
Sequences flagged as poor quality0
Sequence length35-76
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT55740.19017491042263593No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGAGATGTTGGAACTCTACCAATTGGAG46880.159946175109673No Hit
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC43470.14831186501743782No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN41100.1402258489122773No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC40110.13684814598227354No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA31150.10627822855516882No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)