FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003685568

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003685568
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2247
Sequences flagged as poor quality0
Sequence length35-76
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN391.7356475300400533No Hit
TGTGTTGGGTGTGTTTGGTGTGTTGGGTGTGTTTGGTGTGTTGGGTGTGT120.5340453938584779No Hit
TGTGTTGGGTGTGTTTGGTTTTTGTGGGAGGTAATTTAATCATGGGGGCA50.22251891410769914No Hit
TGTGTTGGGTGTGTTTGGGGGTGGGTTGGGATAACCGTGTGTATTGAACT40.1780151312861593No Hit
TGTGTTGGGTGTGTTTGGTGTTTGTGGTGAGCCGAGATCGTGCCATTGCACCCTAGCCTGGGCAACAAGAGTG40.1780151312861593No Hit
TGTGTTGGGTGTGTTTGGTGGTGTGTGGGATGATGTCTCCTGGAGGGGGA40.1780151312861593No Hit
TGTGTTGGGTGTGTTTGGTTGGGGTGGGTCCGTTTTACAGAGTGCTGACTGGTGTGTTTACAATCCTTTAGCT40.1780151312861593No Hit
TGTGTTGGGTGTGTTTGGTGTGGTGTGTGGGTGGGGGCGCGGTGCAAAGC40.1780151312861593No Hit
TGTGTTGGGTGTGTTTGGTGTGTTGGGTGTGTTTGGTTGGGTGGGTTTGC30.13351134846461948No Hit
TGTGTTGGGTGTGTTTGGGGTTGGTGTGATGTTGAGACCCACTTCCACAGGGTGGGGTCTATAAGACCCTCCCA30.13351134846461948No Hit
TGTGTTGGGTGTGTTTGGTTTGTTGTGGTATAACTGGATGACAGCTCTGG30.13351134846461948No Hit
TGTGTTGGGTGTGTTTGGGGGTGTTTTGAGGATTTCGTTGGAAGCGGGAA30.13351134846461948No Hit
CTCTGTCACCCAGGCTAGAGTGCAGTGGTGTGATCTTGGCTCACTTCAAC30.13351134846461948No Hit
TGTGTTGGGTGTGTTTGGGTTTTGTTGGTCTTTTCTAGACAAAGCATGTT30.13351134846461948No Hit
TGTGTTGGTTGTGTTGGGTGTGTTGGGTGTGTTTGGTGTGGGGGTGTTAA30.13351134846461948No Hit
TGTGTTGGGTGTGTTTGGGGGGTGTTTGAAATCCCAACTACTCAGGAGGCTGAGGCTGGAGAATCGCTTAAACCC30.13351134846461948No Hit
TGTGTTGGGTGTGTTGGTGTGTTTGGTTTTTGTTGGATTTCCATTACTTC30.13351134846461948No Hit
TGTGTTGGGTGTGTTTGGTTGGGTTGTTGGGAATCCCACCTGCTTGGGAG30.13351134846461948No Hit
TGTGTTGGGTGTGTTTGGGGTTTGTGTTTAGTTCTGTTTATGCGATTGAT30.13351134846461948No Hit
TGTGTTGGGTGTGTTTGGTTTGGGGTTGCATGCATTGGGTAGAACTTGGC30.13351134846461948No Hit
TGTGTTGGGTGTGTTTGGGGGTGGTTGGCCTGGGCCGTGCACGCCGCGGG30.13351134846461948No Hit
TGTGTTGGGTGTGTTTGGTGTGTTGGGTGTGTTTGGGGTGTGTTTAGCAG30.13351134846461948No Hit
TGTGTTGGGTGTGTTTGGTGTGTTGGGTGTGTTTGCTGTGTTGGGTGTGT30.13351134846461948No Hit
TGTGTTGGGTGTGTTTGGGTTTTGGGGTGTCATAGAACACTACATTCATT30.13351134846461948No Hit
TGTGTTGGGTGTGTTTGGGTGGGTTGTGTGGACATATGAAAGACATGCTAAACATCGCAATGCTCCTGAGTC30.13351134846461948No Hit
TGTGTTGGGTGTGTTTGGTGTGTTGGGTGTGTTTGGTGGTTTGTGTGAAT30.13351134846461948No Hit
TGTGTTGGGTGTGTTTGGGGTGTTGTTGTGTTGCCCAGACTGGGTCTTAA30.13351134846461948No Hit
TGTGTTGGGTGTGTTTGGGGGTTGTGGTAAGGCTCCAGCAGGAGGCAGCA30.13351134846461948No Hit
TGTGTTGGGTGTGTTTGGTGTTTTGGTTTTTCTCCCCTTTTGGACGCTGGTGATTAAGAGAGTCTGTAGGGAGG30.13351134846461948No Hit
TGTGTTGGGTGTGTTTGGTGTTTTGGGCATCTGCCTGCCTGTCAGTCTCT30.13351134846461948No Hit
TGTGTTGGGTGTGTTTGGGGGTTGGGTTGAGCTGAGATCACGCCATTGCACTCTAGCCTGGGCAACAAGGGCAAA30.13351134846461948No Hit
TGTGTTGGGTGTGTTTGGGTTTTGTTGGTTTGTTTGCTTGTTTTGAGATG30.13351134846461948No Hit
CCCTGGGGTGGAGGGCACCCAGCAGATGTGGTCCTGGGGACAGAGCCACC30.13351134846461948No Hit
TGTGTTGGGTGTGTTTGGTGGTTTGTGGTGTGGTGTAAAAGGAACCCCTTTACACTGCTGGTCAGAATGTAAACT30.13351134846461948No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)