FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003685629

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003685629
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences91
Sequences flagged as poor quality0
Sequence length35-76
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN33.296703296703297No Hit
TGTGTTGGGTGTGTTTGGTTTGGGTTGGCTTGGGATGTCAATAGCGATTAGGTCCACTTGTAGAAGAACTGATA11.098901098901099No Hit
CTGTGACTTCTCACCATGCTGGCCACTGTCTCAGGCAATGGGATGCAGCA11.098901098901099No Hit
TGTGTTGGGTGTGTTTGGGGGTTTTGTGTCTCTATCTTGATCATATTCTT11.098901098901099No Hit
TTGGGTGTGTTTGGGTGTGTTTGTGAATATGGCCCCTATGGTAAAAATGCAAAACACAACAGATTAGGAACTACC11.098901098901099No Hit
TTGGGTGTGTTTGGTTGTGGTTGTTCGTTCCATTGTAGGGCAGCACAGATGGTGTAGACAACACTAGACCTCACA11.098901098901099No Hit
TGTTTGGGGGTGGTTGGTGCATTTACAAACCTTTAGCTAGAGTCAGAGCACTGAACCCTGAGATAACAATCCATA11.098901098901099No Hit
TGGGTGTGTTTGGTTGGGTTGTGCAGTAAAGGAGGGGAGGGGTGGATAAA11.098901098901099No Hit
TGTGTTGGGTGTGTTTGGTTTGTTTGTGGGTCTGAGATCAGTCAAGGAGC11.098901098901099No Hit
TTTGGTGTGGGTGTTATTGTCGTTGTTGTTTTTTCTGATGGGAGCCTCCG11.098901098901099No Hit
TGTGTTGGGTGTGTTTGGTTTTTTGGGGTGTGTTGGGTGTGTTTGGTTTG11.098901098901099No Hit
TGTGTTGGGTGTGTTTGGTGTGTTGGGTGTGTTTGGTTTTTGGTTGTGTT11.098901098901099No Hit
CCTCAATTGTATGGTTTTCCCTGACCACCCATTTAAAATAGAAACCTCTT11.098901098901099No Hit
TGTGTTGGGTGTGTTTGGGGGTTTGTGTTGGGTGTGTTTGGGGTGTGTTG11.098901098901099No Hit
TGTGTTGGGTGTGTTTGGGGGTGGTTGGGGATAAATCAAACTAAGGCCTATTAAATGGAATAATCCAGTCCCCCG11.098901098901099No Hit
TGTTTGTGTTGGTTTGGATTAAGGCAGAGCACATGAGTGAAAAAAAATGAATCTCCAAGCACCATACATGGACCC11.098901098901099No Hit
TCCCAGACAATGCGTTGTTAGTCGGAACTCAAACGCATATTCACCAATGCCAACAATTCCGAAGATATGACCACT11.098901098901099No Hit
TGGGTGTGTTTGGGGGGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTG11.098901098901099No Hit
TGTGTTTGGGTTGTTGTGTAAATTAATTGTATTGATGGATGCATGGGTGA11.098901098901099No Hit
CAGGAACTGTTTTCATAGATCTTTTCAAACACAATTAAGTGGATCTAAAA11.098901098901099No Hit
TGTGTTGGGTGTGTTTGGTGTTTTGGTGTTATGTAGATGTCTTGTTTTTACCTCTGAGTGCATTTAGAAGGGAG11.098901098901099No Hit
TGTGTTGGGTGTGTTTGGGGTGTGTTTGTGTACAGAAATTTATCCATATCTTCTAGATATTCTAGTTTATTTGCA11.098901098901099No Hit
CCAGAACACTGCTACAATTGTCTGAATGTTTGAAACTAACATCCGAATCC11.098901098901099No Hit
TGTGTTGGGTGTGTTTGGGGGGGGGTTGTAACAGGTGTAGATGGGGGTGAAGGACAAGCATGATCATGATTGC11.098901098901099No Hit
GTTGGGTGTGTTTGGTGGGGGTTGGAATGCAGGATGAAAACTGGATTCTC11.098901098901099No Hit
TGTGTTGGGTGTGTTTGGTGTGTGGTTGTGATTGCGGGTTTAGGGTATAA11.098901098901099No Hit
CTTCATTGACTTCTATTGGGATTCCAGTTGTATTAGTCCATTTTCACACT11.098901098901099No Hit
TGTTTGGGGTTGTTGTGAAAGTGTTGGCCAAGAATGAGTAGTTTCTACTTGGATGGAACCAGTAGAGAAGGTCCA11.098901098901099No Hit
TGTGTTGGGTGTGTTTGGGGGGGTTGGTGGGTATTAAAATATACAAACAA11.098901098901099No Hit
TTGGGTGTGTTTGGTTGTTTTGGGAGAATTGGGAGTATAAGGATTACAAT11.098901098901099No Hit
AGATGATACTCAGATGGAAATTACTTTCAGAAAAAGATCTAAACTTGTAGATTCCTGAT11.098901098901099No Hit
CCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGCAGGCT11.098901098901099No Hit
TGTGTTGGGTGTGTTTGGTGGGTTGGGAAAGATTTTTCATTTTTGAGAGTATGGGTCTGGGCGATGGATATGAGC11.098901098901099No Hit
TGTGTTGGGTGTGTTTGGTGTGTTGTGTTTTGTTGGTTGTTTTTGGTTTG11.098901098901099No Hit
AAAATTAGCCGGGTGTGGTGGTGCGAGATTGTAATCCCAGCTACTTGGTA11.098901098901099No Hit
TGTGTTGGGTGTGTTTGGTGTGGGTTTGTGAATATGTTCGCCGGATTCTG11.098901098901099No Hit
GGTGTGTTTGGTGGTTGTTTGGAGGAGGTGATGCAGTATATCAGCGCTGA11.098901098901099No Hit
TGTTTGGTGGGGTTGTTTGATTTTTTTCTTGTAAATTTTGTTTAAGTTCT11.098901098901099No Hit
CGAAATACATAAATCTGAACCAAAGCAATATGCTGTTTTGGGGAAAATATATGAATGCAAATAAAAGAAATCTAA11.098901098901099No Hit
TTGGGTGTGTTTGGGGGTGGGGGTGGTCGTGTGAATTTTAAGTGCTGTGC11.098901098901099No Hit
TTTCAACTTTTGGCTATACATTTAATACCAAAGCATTGCTGAAAAAAAAC11.098901098901099No Hit
GTGTGGTTTGTTTGTGGTTGTGGGTGCCTGCAATACCAGTTACAAACTCT11.098901098901099No Hit
CCCCAGTGGGAAGGGAGCTCTCCTCCTCCTGGGGCTACTCTTCCAGGTGT11.098901098901099No Hit
TGTGTTGGGTGTGTTTGGTGTGTTGGGTGTGTTTGGTTTGTGGTTTATGA11.098901098901099No Hit
TGGGTGTGTTTGGGGGTTGGGTTGGCACAATAGAATAGCATGCTCAGTAGTGCCAAGTGGATCCTTCGACAAGTT11.098901098901099No Hit
TGTTGGGTGTGTTTGGTGTGGGTTGGTTTGCTAAAGGGCTGCCTTTGCCTCTTCTGGAAGTCAGTGTGCTTGTT11.098901098901099No Hit
ATTCACTGCCTAGCATGCCTGAATACACACATTACTGCTCAATAACCTTCAATAGCTCCTCACTACACACCAGT11.098901098901099No Hit
TGTGTTGGGTGGGTGTGGGGCGGGTGGCTTGGGGGATCTAGGTACGCTCACAGGGCTGGTTGTAACATACTGAAT11.098901098901099No Hit
TGTTGGGTGTGGGGGAGGAGCCAGGGCGGATGGGCCTTTACAGACTCCTA11.098901098901099No Hit
GGGTGGGAACTGACTGCAAAATACAAAGAGAAACAGCAGAATCAAAATTC11.098901098901099No Hit
TGTGTTGGGTGTGTTTGGGTGGGGGTTGGGACTACCTATTTCTAATCAGA11.098901098901099No Hit
TGTTGGGTGTGTTTGGGTGTGGGTTTTTTTTTTTTTTTTTTTTTTTTTTT11.098901098901099No Hit
CCAAGATATGTGGGGAGGGGTGAGTATAGCCCAGGTCTTGCTGGAGGAAC11.098901098901099No Hit
TGTGTTGGGTGTGTTTGGGTTTTTGGTGCATCAGACACGACGAAGTGCAT11.098901098901099No Hit
AGTGTTGGGTGTGTTTGGGTTTGGTTGTGTAGAGATATGTTGCCCAGGCTAGTCTCGAACTCCTAACCTCAAGTG11.098901098901099No Hit
TTTGGTTGTGTGTGGGAAGGTTGGGAAAGGAAATTTGGGATCTTAAGTAG11.098901098901099No Hit
TGGGTGTGTTTGGGTGGTGTGGGTAGTTTCGTCAGTGAGAGCTAGCTCTC11.098901098901099No Hit
TGTGTTGGGTGTGTTTGGTGTTGTTTGGTTATAAGGTATCACTTTTTACC11.098901098901099No Hit
TGTGTTGGGTGTGTTTGGTGGTTGTTGTAATCCCAGCTACTCAGAGGCTG11.098901098901099No Hit
TGTGTTGGGTGTGTTTGGTTGGGGTTTTGATGACCTGAAAAAACACTGTGTATACTACAAAGTGATATTCACATT11.098901098901099No Hit
TGTGTTGGGTGTGTTTGGTTTTTGTTGGGAATAGAGTGAGTCTGTGTTTC11.098901098901099No Hit
TGTGTTGGGTGTGTTTGGTCTGTGTTTGGTGAGTTTGGCTGGGTTTTGGA11.098901098901099No Hit
GTGTTTGGGTTGTGGGGGCTAAGTGGAACTCATTTTCAAAAATGTCCCATGATAATGACAAGTCAAAATAACCAC11.098901098901099No Hit
CATGTCTGTGATCCCAGATAATCAGGATTATGAGTAAGTAGAAACACAAGAACATTGAACTCAAAGGAAGTATTG11.098901098901099No Hit
TGTGTTGGGTGTGTTTGGGTGGTTGGTGCAGCACTGGAAAATCTAGCTAGAGGAAGTAAAATGCAACAATAAGAC11.098901098901099No Hit
ATGGAGAAGGCTCACTGGGTCACTGTTGACTCCATTTTTCTTCATGAATC11.098901098901099No Hit
TGTGTTGGGTGTGTTTGGGGGTGTGGGGTTTATGTGAGTGATGTTGTGAA11.098901098901099No Hit
TGTGTTGGGTGTGTTTGGTGTGTTTTGTCAAGGAATTATAAGACAAAATC11.098901098901099No Hit
TGTTTTGTGTGTGTTTGCAGAGTTGGGCATGAATGGTGACATCAGCCAGAGCTCTGGCCCAGTCCTACGCATCCA11.098901098901099No Hit
CAGTGAGGGGTGCAGGTACCTGGCTTCACCACCTAAGCCCCCCGTTGGGC11.098901098901099No Hit
TGTTTGGTTGTTGTTTGTTTGTTTGTTTGGAGATGGAGTCTCATTCTGTCGCCCAGGCTGGAGTACAGTGGCTCA11.098901098901099No Hit
TGTGTTGGGTGTGTTTGGTGTGTGGGGTAGGACTAACAAGCATGGAAGAA11.098901098901099No Hit
TGGTTGTTTGTGGTGTGTTGGGTGGGTGTGTTTGGGGTGTTTTGTCGGCTCAGAATAGGGGAGGGGCAGGCAAAC11.098901098901099No Hit
TGTGTTGGGTGTGTTTGGGGTGGTTGGGTATGTTGTGTGTGTTTGGGGTT11.098901098901099No Hit
TGTGTTGGGTGTGTTTGGGTTGGTTTTGGACTGGTAATTAATGGTTGACTCTCTTGAGTTTATTAGATGTGAA11.098901098901099No Hit
TGGTGGGTGGTTTTGATTATTGGGTACTTAAAAATCTATAATAATTTTCT11.098901098901099No Hit
TGTGTTGGGTGTGTTTGGGTTGGGTGGTGGGTGGGTGTTTTTGGATGTGATTAAAGTGTGGGCCGGGTCCGGAGC11.098901098901099No Hit
TGTGTTGGGTGTGTTTGGGTTTGGGTGTTTCTACACAGTAACACTAAATT11.098901098901099No Hit
CTATTTTATGGAAACTGAACTTCCTTAGCATATACACTTGCAAGGGCTGCCTGCCACAACCAACCAAACACACCC11.098901098901099No Hit
TGTTGGGTGTGTTTGGTTGGGGTTGTATAGTTGGTGAAAGGCCTAGATTTCAGAAGTTAAACCCACGGTTTAGCT11.098901098901099No Hit
TGTGTTGGGTGTGTTTGGGTTTTTTTGTTAGTTATCATCCAATACTATTT11.098901098901099No Hit
TTGGGTGTGTTTGGGGTGTTTTGGTTCAGAAAGGAGGATTTAGGACATTTTGATGACCTCAAATAATTGTACGAA11.098901098901099No Hit
TGTGTTTGGGGGTTGTTTGAGACAAGGTCTCACTCTCTCACCCAGGCTGG11.098901098901099No Hit
TGTGTTGGGTGTGTTTGGGTTTGTGGGGTAATTATGTAAAGGCAGCTTTGCCATCCTAGAATACGCTACTAGCT11.098901098901099No Hit
TGTGTTGGGTGTGTTTGGTTTTTTGGGTCACGATGGGAGTCTTCATACCA11.098901098901099No Hit
TGTGTTGGGTGTGTTTGGTGTGTTTTGTTTGTTTTTTTTTTTGTGTGTTT11.098901098901099No Hit
TGTTTGGGTTTGGTGTGGGAACAGGAAGCATGGAAAAAAGCGTAAATGGAAAGCAAGCCACTCAGTACCACATC11.098901098901099No Hit
TGTTTTTGGGATGGAGTCTTGCTCTGTATCCAAGGATGTAGTGCTGTGGCGTGTTCTCGGCTCACTCGACCCTGC11.098901098901099No Hit
TGTGTTGGGTGTGTTTGGTGTGTTTGTTGTGTATTGAGTCTTGATTATTC11.098901098901099No Hit

[OK]Adapter Content

Adapter graph