FastQCFastQC Report
Fri 2 Sep 2022
EGAF00003686052

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003686052
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences400964
Sequences flagged as poor quality0
Sequence length35-76
%GC48

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN15934839.74122365100109No Hit
TGTGTTGGGTGTGTTTGGTGTGTTGGGTGTGTTTGGTGTGTTGGGTGTGT6400.1596153270617811No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)