FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003686518

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003686518
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29
Sequences flagged as poor quality0
Sequence length75-76
%GC37

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGATAGATAGCCACCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTT13.4482758620689653No Hit
TGCCAGGGAAGACTACAAGGTGCGGATTGATAAGTACGATTACTCCAAGCCCATCCAGGGGCAACAGAAGAAGCC13.4482758620689653No Hit
GCCCATTCTTTATTTGAGGGTACACTCTCAGCTCCATATACCAACCTTCA13.4482758620689653No Hit
GGAAGGCCTATCATCAGTGGGGTTGTATTCACCATCATCCAGGGTACCATCTTCATACAAGGTACTAGCTATGAC13.4482758620689653No Hit
GTATCCCAATAGGAGGTTTCCTCCCATGGTTTTCAAAACAATCACCATCA13.4482758620689653No Hit
GATATGGACTCTAGAATAGGATTGCGCTGTTATCCCTAGGGTAACTTGTT13.4482758620689653No Hit
CAGTGGGATTGTATTACGTGTTGCATATATCTTGATTTTTCACAAAACAT13.4482758620689653No Hit
TTACAGCAGCGATTAAGGCAGAGGCGTTTGTATCTGCCATTATAAAGAAG13.4482758620689653No Hit
ATTTAGTCTACTTCTATTTTGACTGACTCTTTAAATTAGTACAATTTTTC13.4482758620689653No Hit
CTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAAC13.4482758620689653No Hit
GAAAAGTACTGACCAGCGTCACACAAAAACGGAACAGGGCTGACGCCGCT13.4482758620689653No Hit
GTTTTATTAACCATTCAAGTCCAGTAGCATCTGGTAAGATTGGGACAGAA13.4482758620689653No Hit
CCTCAAGCGTTGAGCGGAATGCAGCAATCAATGTCGTCGGAAGATCCTGA13.4482758620689653No Hit
ATATCCAAGCCCAGTGTGCCATCATAATGTTTGTTGTAACATCGAGAGTT13.4482758620689653No Hit
ATTTCAGTATGAGGAAAAACAACAACAAACTGAAGTGCGCTTTCCGTCCT13.4482758620689653No Hit
GTTTAAAGTGGCAATGAACTACCTACAGCTATACAATGTTCCTGACTGTT13.4482758620689653No Hit
TTTAACACCAGAAGGAAAAATATTTTTGAAGAAAATTGGTTATGTTGATT13.4482758620689653No Hit
CTTTTCTCCCACCCAAATTCTTGATCAAGAGTTTTTCAAGTAAAGACATG13.4482758620689653No Hit
GTATTTGCATTATTGATGGTTTTTACTATGTTGGGTATGCTGTTCGATTT13.4482758620689653No Hit
TCTTTACAGCAAATACCAGCGGCCCTGACCCCGGGGAACAGTCGCATGAC13.4482758620689653No Hit
ATATATGACAAAATGTTTCATTCATTATAACAAATTTCCAATAATCCTGT13.4482758620689653No Hit
TATGCACTGTACATTCCACAAGCATTGCCTTCTTATTTTACTTCTTTTAG13.4482758620689653No Hit
AATAAACGAAGAGTAATTATATTTTTTTTTTTATAATAATTTTATGAGTG13.4482758620689653No Hit
TAATTACAGTGCTTGTTTGTCGAAATGAAAACTGAAGACAAGTATACAAA13.4482758620689653No Hit
GGTCATTTCTAATCAGAACACACTATTGCCAGGAACACAGTAGTTATTGT13.4482758620689653No Hit
ATAGATGCCTCTTTAAAATATCTAAGTGCTGGGGTTATGAGTAGGGATGA13.4482758620689653No Hit
GAATCATTGGAGTGCCAGTAATTCTACCACGCCTTATATTTAAAGACAAAAAGAAGTGTCTAACAACAACATCCA13.4482758620689653No Hit
GTATTGGGTTATGGCAGGGGGTTTTATATTGATAATTGTTGTGATGAAAT13.4482758620689653No Hit
ATCTATCCCTACCAAGGCTTATATTGAAGTATAAACCAATGAGAGAGCCT13.4482758620689653No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)