FastQCFastQC Report
Wed 11 May 2022
EGAF00003686815

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003686815
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33954165
Sequences flagged as poor quality0
Sequence length35-101
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGA3077470.9063600886665891No Hit
ACTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACG1226610.3612546502027071No Hit
CACTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAAC634630.18690785062745616No Hit
CCCAGACCAAAGCCAATGCCGGCTCCACCACCGAAACCAAATCCACTCCC474500.1397472151060113No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)