FastQCFastQC Report
Thu 16 Jun 2022
EGAF00003686892

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003686892
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences46365865
Sequences flagged as poor quality0
Sequence length35-101
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG664020.1432131159420837No Hit
CCATAATCGGTTTCAAGGTAACGATGGTGTCGAGGTCTTTGGTGGGTTGA509260.10983511253375733No Hit
GTTTAAACAGTTCAGTGATCTTTAGTGCATTGTTTATGTGTGGGTTTCTC503370.10856478143996667No Hit
CTGGGAGGTCACTCTCCCCAGGCTCTGTCCAAGTGGCATAGGGGAGCTTA468050.10094710839536802No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)