FastQCFastQC Report
Wed 11 May 2022
EGAF00003946414

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003946414
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72891035
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCACAATG7163597698.27817097123123No Hit
GCACCATG2536740.3480181067534574No Hit
GCACAATA2245140.3080131870812371No Hit
GCACACTG1732240.23764788084021582No Hit
GCCCAATG1249480.17141751382731774No Hit
GCACAAAG821030.1126379945078294No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)