FastQCFastQC Report
Mon 12 Sep 2022
EGAF00003946443

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003946443
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35168036
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTACCCA3482871399.03513804410345No Hit
TTTACCAA787770.2240017042748705No Hit
NTTACCCA551290.15675882497390528No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)