FastQCFastQC Report
Sun 11 Sep 2022
EGAF00003946446

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003946446
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22351271
Sequences flagged as poor quality0
Sequence length8
%GC25

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TATGATTC2214059199.0574137819724No Hit
TATGCTTC408600.18280839599680931No Hit
TATGATAC256360.11469593832046508No Hit
TATGATTA238470.10669191922016426No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)