FastQCFastQC Report
Wed 14 Sep 2022
EGAF00003946751

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003946751
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences42144345
Sequences flagged as poor quality0
Sequence length51
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGAT1689730.4009387261802265No Hit
GCCGGCTTCACGCTCAGGAGAAAACGCTACCTCTCTTCCTCGTGGTTTTCG532160.1262707962361261No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)