FastQCFastQC Report
Tue 13 Sep 2022
EGAF00003946901

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003946901
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72937923
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGCCGCAGGCTCCACTCCTGGTGGT1015830.139273228276599No Hit
CGTTCGTTATCGGAATTAACCAGACA879780.12062038015532743No Hit
ACGGGCTGTTAATTGTCAGTTCAGTG744870.10212382932812607No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)