FastQCFastQC Report
Sun 14 May 2023
EGAF00003946903

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003946903
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences112053545
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTCGTTATCGGAATTAACCAGACA1708830.1525011993150239No Hit
AAGCCGCAGGCTCCACTCCTGGTGGT1570560.1401615629385041No Hit
ACCTTTAAGTTTCAGCTTTGCAACCA1273320.11363495907246843No Hit
GTCTCGTTCGTTATCGGAATTAACCA1191950.10637325218046427No Hit
AGGTCCGTCTTGCGCCGGTCCAAGAA1122320.10015925868298053No Hit
CCACCTACTAAGAACGGCCATGCACC1121960.1001271311853632No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)